Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139375839
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Entry
139375839 CDS
T10872
Name
(RefSeq) arf-GAP domain and FG repeat-containing protein 1b isoform X1
KO
K15044
Arf-GAP domain and FG repeats-containing protein 1
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ocla03019
]
139375839
04131 Membrane trafficking [BR:
ocla04131
]
139375839
Messenger RNA biogenesis [BR:
ocla03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
139375839
Membrane trafficking [BR:
ocla04131
]
Endocytosis
Clathrin-mediated endocytosis
Others
139375839
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ArfGap
Motif
Other DBs
NCBI-GeneID:
139375839
NCBI-ProteinID:
XP_070973851
LinkDB
All DBs
Position
20:complement(8783042..8789576)
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AA seq
475 aa
AA seq
DB search
MATSAKRKQEETHLKMLREMTSQPPNRKCFDCDQRGPTYANMTVGSFVCTTCSGILRGLN
PPHRVKSISMTTFTLQEIEFLQKHTNEVCKYIWLGLYDDKTLVVPDFREPQKVKEFLQEK
YEKKRWYVPPDQARTVAMAQASKSGSSASSTASTPEVQPLKTLQLNKTPLTRQSPMVVRS
LAHPIVQEKKFDLLTDLGGDIFAALPSQAASNANFANFANFPSQSVTKVNSKADFANFEM
FGNSGVPPHFRTSPPSQSFASGRGVPVPSAAGAVPAQSQLGTSAEDRYAALAELDNELSS
SAPTGSSVQGESRNLFGAVLGTSPAQTQPVLPNMQQGFGAVSSNNPFVAAAAPDMATNPF
QTNGIAPAAASFGTGSMSMPAGFGNASSYCLPTSFSGTFQQPFPGQAPCPYPQPGAYQPQ
QPNGPGGYTVYGQTKPSMTPFGQLMAGPGMTNNPFMAGAPAGSYPSGSSNTNPFL
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgagtgcgaagcgaaaacaagaagagacgcatcttaagatgctccgggaaatg
actagccagcccccgaataggaagtgctttgattgcgaccagcgcggcccgacttatgcc
aacatgacagtgggttccttcgtctgtaccacctgttctggcatcctacgaggcctgaat
cccccccacagagtgaagtccatctctatgaccaccttcacactacaggaaattgaattc
ttacagaaacacaccaatgaggtttgtaaatacatctggttggggctgtacgatgacaag
acattggttgttccagacttccgtgaaccacagaaagtaaaagaattcctccaggaaaaa
tatgagaagaaaagatggtacgtccctccagaccaggcgaggacggtagccatggcccag
gcctccaagtcgggctcctcagccagcagcacagccagcaccccggaggtccagcccctg
aaaaccctgcagctcaacaagacccccctaacacgtcagtccccgatggtggttcgttcc
ctggcccatcccatagttcaggagaagaagtttgacctccttacagacctgggcggagac
atctttgccgctctgccctctcaggctgccagcaacgccaattttgccaactttgcgaat
ttccccagccaatcagtgactaaggttaactcaaaagctgactttgccaactttgagatg
tttggcaactctggagtacctccgcatttcaggacctcaccaccctctcagtcgtttgcg
tcagggcgaggtgtcccagtgccatcagcagctggtgctgtaccagcccagtcccagctg
ggcacctcagcagaggaccgctatgctgccctggctgagctggacaacgagctgagctcc
tctgcccccacagggagtagtgtccagggtgaatctaggaatttgtttggagctgtgttg
ggaacctcgcctgcccagactcagccagtcttacccaacatgcagcaaggctttggagcc
gtctcatccaataacccatttgttgctgctgctgccccagatatggctaccaaccccttc
cagaccaatggtatagcaccggccgcagcctcgtttggcacaggctctatgagtatgcct
gctggctttgggaatgcctcctcttactgcctcccgaccagttttagtgggaccttccag
cagcccttccctggccaggccccctgcccttacccccagccaggggcctaccaaccccaa
caacctaatggccctggtggatatacagtctatggacagaccaagccctccatgaccccc
tttgggcagctcatggctggtcctgggatgaccaataacccattcatggcgggagccccg
gccggatcctacccctctggaagctccaacaccaaccccttcctgtag
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