Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139375860
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Entry
139375860 CDS
T10872
Name
(RefSeq) parafibromin
KO
K15175
parafibromin
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ocla03021
]
139375860
Transcription machinery [BR:
ocla03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
139375860
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CDC73_N
CDC73_C
PemK_toxin
Motif
Other DBs
NCBI-GeneID:
139375860
NCBI-ProteinID:
XP_070973893
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All DBs
Position
20:10547363..10583787
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AA seq
530 aa
AA seq
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MADVLSVLRQYNIQKKEIVAKGDEVIFGEFSWPKNVKTNYVIWGTGKEGQPKEYYTLDSI
LFLLNNVHLPHPSYVRRAATENIPVVRRPDRKGLLSYLNGESSTSTSIDRSAPIEIGLQR
PTQVKRAADEVSSEAKKPRIEDEERVRLDKERLAARLEGHKEGIVQTDQIRSLSEAMSVE
KIAAIKAKIMAKKRSTIKTDLDEDITLKQRSFVDAEVDVTRDIVSRERVWRTRTTILQST
GKNFSKNIFAILQSVKAREEGRAPEQRPAQNTTQVDQSIRNKQPVPAAYNRYDQERFKGK
EETEGFKIDTMGTYHGMTLKSVTEGASARKAQTPALQPIPRPVSQARPPPNQKKGSRTPI
VIIPAATTSLITMLNAKDLLQDLKFVTSEEKKKQGIQRDNEVLLQRRKDQIQPGGATLSV
TVPYRVIDQPLKLAPQDWDRVVAVFVQGPAWQFKGWPWLLPDGSPVDIFAKIRAFHLKYD
EQKMDPNVQKWDVTVLELSHHKRHLDRPMFLKFWETLDRYMVKHKSHLRF
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgtgttgagtgttcttcgccaatacaacatccagaaaaaagaaatcgtcgcc
aaaggagacgaagttatctttggagagttctcttggcccaaaaatgtcaagactaactat
gtcatttggggaactggaaaggagggtcagcccaaggagtactacaccctggactccatt
ttgttcctgctcaacaatgtgcatctccctcatccatcctacgtgcgaagggctgcaaca
gagaacattccggttgtcagaagacctgatagaaagggcttgctgtcctatctcaatggg
gaaagttctacttcaacaagtatcgacagaagtgcccccatagagattggtttgcaaagg
ccaacgcaagtcaaacgagcagcagatgaggtgtcatctgaagccaaaaaacccaggatt
gaggatgaggaacgagtgcgactggacaaggagcgtctggctgctagactggagggccac
aaagagggcatagtgcaaactgaccagatcaggtcactgtccgaggccatgtccgtggag
aagatcgccgccatcaaagccaagattatggccaagaagcgctccaccatcaagacagac
ctggatgaggatatcacactgaagcagaggagctttgtggacgccgaggtggacgtgacc
agggacatagtcagcagggagcgggtgtggaggaccaggaccaccatcctacagagcact
ggaaagaacttctccaaaaacatctttgccatcctgcagtcggtgaaggccagggaggag
ggacgcgcccctgagcagagaccagcacagaacaccactcaggtggaccagtccataagg
aacaaacagcctgtcccagctgcttataaccgatacgatcaggagagattcaaaggaaaa
gaggaaacggagggtttcaagattgacaccatgggaacataccacggcatgaccctgaag
tctgtgacggagggagcgtctgccaggaaggcccagacaccagccctgcagcccatcccc
agaccagtttcccaagccagacccccaccaaatcaaaagaagggctctaggactcccatc
gtcatcatcccagcggccaccacgtccctcatcaccatgctcaatgccaaggacctcctg
caggacctcaagtttgtgacgtcagaggagaagaagaagcagggcatccagcgggacaac
gaggtgctgctccagagacgtaaggaccagattcagcccgggggggcaacgctcagcgtc
accgtgccctacagggttattgaccagcccctcaaactagcaccgcaggactgggatcgt
gtggtggctgtgttcgtgcagggccctgcctggcagttcaaaggttggccttggctgttg
cctgacggatctcctgtggacatttttgctaaaataagagcctttcatctgaagtatgac
gagcagaagatggatcccaacgttcagaagtgggatgtcaccgtgttggagctgagccac
cacaagcgccatctcgaccggcccatgtttctgaagttctgggagaccctcgacagatac
atggtgaaacacaagtcccacctgaggttctga
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