Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139375873
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Entry
139375873 CDS
T10872
Name
(RefSeq) LOW QUALITY PROTEIN: coiled-coil domain-containing protein 38-like
KO
K25439
cilia- and flagella-associated protein 100
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ocla03037
]
139375873
Cilium and associated proteins [BR:
ocla03037
]
Motile cilia and associated proteins
Modifier of inner arms (MIA) complex
139375873
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GFIT
Motif
Pfam:
DUF4200
Baculo_LEF-10
Motif
Other DBs
NCBI-GeneID:
139375873
NCBI-ProteinID:
XP_070973923
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Position
2:88228289..88236722
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AA seq
599 aa
AA seq
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MPDIKKVKISSPKHTPDAEYLLRRRGGMAESLEETAKPTLDTVWLKSRNSTDDDRKSNNP
FVLPMDRNIFKKREIESVIKQQEKKFFSSLPTQMKSTYLSRLRCRSAPMRSAVEDTIPEP
EKCRREKTTWATVVTKSCSQERENIRDYLSKQREKFMQQYSLSVKQDTIKKLEKDTVIEL
QLIRHAEKHLQQDSAAFEKFIKENDQSSVEAVKLAEKETMLKMEKTAEIKKVTVQMMAMK
SDISKYQEILKEYQTYKTFLMAVGPMEWREEQKRKREDRRATKQKENTNIFCLPSSVKVX
HFVLFYXFQDENKKGPAYARRNSRVTKNSQIRHQSKSGKVSSILHHQERQGSTIPEVPET
AETSDSDEEPELCYSNPRDMLNLLTDLEEQNLSYIQNFQETEEVMDEIRKTIQLTQERMN
SEARILLQQVDILKNTIQREEEKTSELELKSRIFSFGEYRADKQDVMLNVLHKKVKEVYK
VCVGEVDSNISTLHMLANIESRMQDVMDRLETLPPDNIDTVRTQREKEKRLKMREEKLLM
KKHHQEERLRMALERATSDSKKRTGRRLLLRSEPSEIKKKDKTHALTTREQEDALYFFA
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atgcctgatattaagaaagtgaagataagttctcccaaacacactcctgatgctgaatac
ctcttaaggagaagaggtgggatggcagaaagtcttgaggagactgcaaagccaacattg
gatacagtctggctgaaatcaagaaatagtacagatgacgacagaaaatctaacaacccg
tttgtgcttccaatggatcgtaacatcttcaaaaagagagagattgaatctgtaatcaaa
caacaagagaagaagttcttcagcagcctgccgacccagatgaagagtacctacctgtcc
cgactcaggtgccgctctgcccccatgaggagtgctgtggaggacacaatcccagaacca
gagaaatgcagacgggaaaaaacgacatgggccaccgtggtcactaaaagttgcagtcaa
gagagggagaacattagggactacttgtctaaacagcgggaaaagtttatgcagcagtac
tctctgtcagtgaagcaagacaccatcaagaagctggagaaggacacggtgatagagctt
cagttgatcagacacgctgagaaacatctgcaacaggactcggccgcctttgaaaagttc
atcaaggaaaatgaccagagctcagtggaagctgtcaagttggcagagaaagagactatg
ctgaaaatggagaaaacagcagaaattaaaaaagtaacagtacaaatgatggcgatgaaa
agcgacatctcaaagtatcaagaaatactgaaggagtaccagacctacaaaacgtttctc
atggccgtcggacccatggagtggcgtgaggaacagaaacgcaagagggaggacaggaga
gcaaccaagcagaaagagaatacaaacattttctgtcttccatcatcggtcaaagtctga
cattttgtattattttactgattccaagacgaaaataaaaaaggtccagcgtatgccaga
cgcaattcaagagtcacaaaaaattctcagataagacatcaaagcaaaagtggcaaagtc
agcagcatacttcaccaccaggagagacaggggtccaccatccctgaggtgccagagacc
gcagagacctcagacagtgacgaggagccagagttgtgttactccaaccccagggacatg
ctgaatttgctgactgatctggaggagcagaacctgtcctacatccagaacttccaggag
acagaggaggtcatggatgagatccgcaaaaccatacagttgacgcaggaaagaatgaac
agtgaggcccggatcctgctgcagcaggtagacatcctgaagaacaccatccagagggag
gaggagaagacctctgagctggagctcaagtccaggatcttctcctttggagagtacaga
gctgacaaacaggacgtgatgctcaatgtgctgcacaagaaggtgaaggaagtgtacaag
gtgtgtgtgggagaggtggactccaatatcagcactcttcacatgcttgccaacattgag
agcagaatgcaggacgttatggaccgactggagacgctgcccccggacaacattgacacc
gtccgcacccagcgggagaaggagaagaggctcaagatgcgtgaggagaagctgttgatg
aagaaacaccaccaagaagagagactccgaatggctctggagagagccacctctgacagc
aagaagaggacgggcagaaggctgctgctgcgatcggagccatcggagatcaagaagaag
gacaagacacatgcgttgaccactagagagcaagaagatgccttgtacttctttgcctga
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