Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139375899
Help
Entry
139375899 CDS
T10872
Name
(RefSeq) septin-2B-like isoform X1
KO
K16942
septin 2
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
139375899
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139375899
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ocla03037
]
139375899
04812 Cytoskeleton proteins [BR:
ocla04812
]
139375899
04147 Exosome [BR:
ocla04147
]
139375899
Membrane trafficking [BR:
ocla04131
]
Exocytosis
Calcium ion-dependent exocytosis
Septins
139375899
Cilium and associated proteins [BR:
ocla03037
]
Motile cilia and associated proteins
Sperm associated proteins
139375899
Cytoskeleton proteins [BR:
ocla04812
]
Eukaryotic cytoskeleton proteins
Septins
Septins
Group 2
139375899
Exosome [BR:
ocla04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
139375899
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Septin
MMR_HSR1
GTP_EFTU
RsgA_GTPase
Dynamin_N
AIG1
Ras
AAA_22
ABC_tran
AAA_16
Roc
VapE-like_dom
AAA_29
AAA_7
KAP_NTPase
IIGP
Motif
Other DBs
NCBI-GeneID:
139375899
NCBI-ProteinID:
XP_070973956
LinkDB
All DBs
Position
20:complement(11841215..11858074)
Genome browser
AA seq
375 aa
AA seq
DB search
MSQVEKMKQGQFTNPETPGYVGFANLPNQVHRKSVKKGFEFTLMVVGESGLGKSTLINSL
FLTDLYPERIIPGAAEKIERTVQIEASTVEIEERGVKLRLTVVDTPGYGDAINSQDCFST
IIAYIDDQFERYLHDESGLNRRHIVDNRVHCCFYFISPLGHGLKPLDVQFMKAIHNKVNV
VPVIAKADTLTLRERERLKRRILDEIDEHSIKIYHLPDAESDEDEEFKEQTRTLKASIPF
AVVGSNQQIEAKGKKVRGRLYPWGVVEVENPEHNDFLKLRTMLITHMQDLQEVTQDLHYE
NFRSERLKRGGRLSSHGYVMSPAQGQGQGPEPEEMDKDMILQEKEAELRRMQEMITKMQA
QMQIKPDGAGDVQHV
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atgtctcaggtggaaaaaatgaaacagggtcagtttaccaatccagagaccccggggtat
gtgggctttgccaatctgcccaaccaggtgcaccgcaagtcggtcaaaaagggcttcgag
ttcaccctcatggtagttggtgagtctggtctggggaagtccaccctcatcaacagcttg
ttcctcactgatctctacccagagagaatcatccccggagcagcagagaagattgagcgc
acggttcagatcgaagcatctacggttgagatcgaggagcgaggggtgaagctccgcctc
accgtggtggacacgcccggatacggtgacgccatcaacagccaggactgtttcagcacc
atcatcgcctacattgacgaccagtttgagagatacctccacgacgagagcggtctgaac
cgccggcacatcgtggacaaccgcgttcactgctgcttctatttcatctccccgctgggt
catgggctgaagcctctggatgtacagttcatgaaggccatccacaacaaagtcaacgtg
gtccctgtcatcgctaaggccgacacactcaccctgcgagagagggagaggctcaagcgc
aggatcctggatgagattgatgagcatagtatcaagatctatcacctccctgacgcagag
tccgacgaggacgaagaattcaaggagcagaccaggactctcaaagccagtattcccttt
gcggtggtgggctccaaccagcagatcgaggccaaggggaagaaggtgcggggtcgcctg
tacccctggggcgtggtggaagtggagaaccccgagcacaacgacttcctcaagctgcgc
accatgctgatcacccacatgcaggatctgcaggaggtgacccaggacctgcactacgag
aacttccgctcggagcgcctcaaacggggcggcaggttgtcctcccatggttacgttatg
tctcctgcgcaggggcagggccaggggcctgagccggaggaaatggacaaggacatgatc
ctgcaggagaaggaggcagagctgaggaggatgcaggagatgattaccaagatgcaggct
cagatgcaaatcaagcctgacggcgcgggagatgtccagcatgtgtga
DBGET
integrated database retrieval system
