Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139375900
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Entry
139375900 CDS
T10872
Name
(RefSeq) claudin-18
KO
K06087
claudin
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla03272
Virion - Hepatitis viruses
ocla04382
Cornified envelope formation
ocla04514
Cell adhesion molecule (CAM) interaction
ocla04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
139375900
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
139375900
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
139375900
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
139375900
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ocla03037
]
139375900
04147 Exosome [BR:
ocla04147
]
139375900
Cilium and associated proteins [BR:
ocla03037
]
Other cilia and associated proteins
Stereociliary proteins
139375900
Exosome [BR:
ocla04147
]
Exosomal proteins
Exosomal proteins of ovarian cancer cells
139375900
Exosomal proteins of colorectal cancer cells
139375900
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMP22_Claudin
Claudin_2
Trp_oprn_chp
Amastin
ThiF
CyanoTRADDas_TM
Motif
Other DBs
NCBI-GeneID:
139375900
NCBI-ProteinID:
XP_070973961
LinkDB
All DBs
Position
20:11874061..11876475
Genome browser
AA seq
242 aa
AA seq
DB search
MATALQTGGFVLGLLGGAAIIAATGMNNWSVKDRQGDVVTSVYTYKGLWQNCEVGTSGFT
ECRPLYGLLGFSGTFQAVRALMIVGIVLGVIGAMIALFSLKCLKMGSMEDSSKAKMTLTA
GVMFIIAGICAIAGASIYANQIVASFMMTTYNPNYGGGMGQGIENGGSMMPRYTFGPALF
VAWIGAALLLLGGILKCVAFRGLQPDKSTYTGVAYKASQAQNRPVYDDHHAEDGKRDNQK
YV
NT seq
729 nt
NT seq
+upstream
nt +downstream
nt
atggccactgcactccagacgggtggattcgtcctgggcctgctcggcggggctgccatc
atcgccgccacggggatgaacaactggagcgtcaaggatcgtcagggggacgtggtgacc
tcggtgtacacctataagggcctgtggcagaactgtgaggtgggcacctcaggcttcact
gagtgtcggcccctctacggcctcctgggcttctcaggtacctttcaggcagtgagagca
ctgatgattgtgggcattgttctgggtgtaataggggccatgatagccctgttctccctc
aagtgccttaaaatgggcagcatggaagattcctccaaagccaagatgacccttacagcg
ggggtcatgttcatcattgcaggcatttgtgctattgctggagcttcaatctatgctaac
caaattgtggctagtttcatgatgaccacctacaaccccaattatggaggagggatggga
cagggcatagagaatggaggaagtatgatgccgaggtacacgtttggccccgccctcttt
gttgcctggataggtgcagctttgctcttattgggcgggattctgaagtgtgttgccttc
aggggactacagccagacaagtcaacctacacaggagttgcttacaaagcctcccaagcc
cagaacaggcccgtctatgatgaccaccatgcagaggatgggaagagagacaaccaaaaa
tatgtataa
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integrated database retrieval system
