Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139375906
Help
Entry
139375906 CDS
T10872
Name
(RefSeq) volume-regulated anion channel subunit LRRC8D-like
KO
K22038
volume-regulated anion channel
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ocla04040
]
139375906
Ion channels [BR:
ocla04040
]
Chloride channels
Chloride channel, volume-regulated (VRAC)
139375906
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pannexin_like
LRR_8
LRR_4
LRR_14
LRR_1
LRR_R13L1-DRL21
LRR_5
LRR_9
LRR_EndoS
LRR_LRWD1
Motif
Other DBs
NCBI-GeneID:
139375906
NCBI-ProteinID:
XP_070973966
LinkDB
All DBs
Position
20:11984453..11991161
Genome browser
AA seq
848 aa
AA seq
DB search
MFTITELASLNDIQPTYRILKPWWDVFMDYLGVVMLMLSIFAMTMQITKDQVACLPCLEK
AVAGPNSWTSQSPQETASSAVSITTVFATPMATKDLPDSAVHEVHNTQPIVVKREGKMQQ
PRPTGIQTNLDYQQYVFVNQMCYHIALPWYSKYFPYLSLIHTLVLMVSSNFWFKYPKTSS
KIEHFVSILGRCFESPWTTKALSETACEDSEENKQRLTGTTSAQRELSQETKDENAANSS
TPMLGNTGVKFSADKPIAEAPSMTILDKKDGEQAKALFEKVRKFRAHVEDSDFIYKLYVA
QTVVKTVKFILILSYTSTFIAAIEFHHICEPKIKHLTGYEQFFCTHNMAFMLRKLLLSYM
ALILIYGMVCLYSLHWLFRRPLKEYSFEKVREESSFSDIPDVKNDFAFLLHMVDQYDQLY
SKRFGVFLSEVSENKLREISLNHEWTFEKLRQLVTRNPQDQQELHLFMLSGLPNAVFDLT
DLEILKLELIPEVRFSAKVSQMTSLQELHLCHCPAKVEQTAFVFLRDHLRCLHVKFTDVA
EIPAWVYLLRSLRELNLVGNLSSENNKMIGLECMRDLKHLKTLYLKSNLTKIPSNLTELS
PHLIKLVVHNDGTKLLVLNSLKKMTNLADLELHNCELERIPHAIFSLTNLQELDLKSNNI
RTIEEVISFQHLKRLTCLKLWHNKIITIPASIGQVKSLESLHLSHNKLETLPPALFHLPK
LRHLDVSHNSITVIPPDLGLLQNLQHFAINANKVEVLPKQLFRCTKLKFLCLSNNVLTNL
PETVGQLVHLAQLELRGNCLDRLPSLLGNCRLLRKNSLIVEDHLFDTLPVEVKESISRET
NVSFASGL
NT seq
2547 nt
NT seq
+upstream
nt +downstream
nt
atgtttaccatcacagagttagcgtcgctgaacgacatccagccgacctaccgcatccta
aaaccatggtgggacgtcttcatggactacctgggggtggtcatgctcatgttgtccatc
ttcgccatgacgatgcagatcacaaaggaccaggtggcgtgccttccatgcctggagaaa
gcagtggcagggccaaactcttggacatcccaaagtccacaagaaaccgcctcatcagca
gttagcataacgacagtgtttgctacaccaatggccactaaagatctaccagacagtgca
gtacatgaggtccacaacacccagcccatcgttgtgaagcgagagggcaaaatgcagcaa
cccaggcccacagggatccaaaccaacttagattatcagcagtatgtctttgtcaaccaa
atgtgttaccacatagccttgccctggtactcaaagtacttcccgtacctctccctcatc
cacacccttgtgcttatggttagtagtaacttctggttcaaataccccaagacaagctca
aagattgaacactttgtgtccattctcggacggtgctttgagtctccgtggactacaaag
gctttgtccgagacagcctgtgaggattctgaggagaacaagcagagactgactggcacc
acttcagcacagagagagttatcacaggaaactaaagatgaaaatgctgcaaactcatct
acccctatgcttgggaatacaggagtcaagttctcagcagataagcctattgctgaagcc
ccaagtatgactatcctggacaagaaagatggggagcaggccaaggctctatttgagaag
gtgcggaaattccgcgcccatgtggaggacagcgatttcatctacaagctctatgtagct
cagactgtggtcaaaacggtcaagtttattttgattctgtcctatacgtcaacatttatt
gctgccatcgagtttcatcacatatgtgaacccaaaatcaaacacttaaccggatatgag
cagttcttttgtacccacaacatggctttcatgttgagaaagctcctcctcagctacatg
gccctcatattgatctatgggatggtctgcttgtattccctccactggctgttcaggcgc
ccccttaaagagtactcatttgagaaagtcagagaggagagtagcttcagtgacattcct
gatgtgaagaacgactttgcgttccttctgcacatggtcgatcagtacgaccagctgtat
tccaaacggtttggtgtcttcctctcggaggtcagcgagaacaagctgagggagatcagt
ctaaaccacgagtggacatttgagaagctcagacagcttgtgacccgaaatccccaagac
cagcaggagctccacctcttcatgctttctggtctccccaatgcagtgtttgacctcacc
gacctggaaatacttaaactagagctaattcctgaggtcaggttttcggcaaaggtttcc
caaatgaccagtctgcaggagctgcacctttgccactgccctgccaaagttgagcagact
gcatttgtctttctccgtgaccacctccgctgccttcatgtcaagttcacagacgtcgct
gagatcccagcatgggtttatttgttgaggagtttgagggagctaaacttagtagggaat
ttaagctcagaaaacaacaaaatgataggactagagtgcatgcgtgatttgaaacatctt
aagacattatatctgaagagcaacctcaccaagatcccctcaaacctcactgagctgtcc
ccacacctgatcaaactggtggtgcataacgatggtactaaactacttgtactgaacagc
ctcaagaagatgacaaacctcgccgatctggagctgcacaactgtgagctggagaggatc
ccccatgctattttcagcttaaccaaccttcaagagctggacctcaaatccaacaacatt
cgcaccatcgaagaggtcatcagctttcagcacctcaagaggttgacctgcctcaaattg
tggcacaacaaaatcatcaccattccagcctcaataggccaggtcaagtctttggagtca
cttcatctttcacacaacaaactggagacgctcccgccggcgctgttccacctccccaag
ctgaggcacttggatgtcagtcacaactccatcacagtgatcccgccggacttgggtctc
ctgcagaacctccagcacttcgcaatcaatgcaaacaaggtggaggtgctgcccaagcag
ctgttcaggtgcaccaagctaaagttcctgtgtctgagcaataatgtcctcaccaacctg
cctgagactgtgggtcagttggtgcatcttgctcagctggagctgagggggaactgtctg
gaccgccttccctcactgctggggaactgtcgccttctacgtaaaaacagcctcattgta
gaggaccacctttttgacactttgcctgtagaggtaaaggagagcattagtcgggagacc
aatgtgtcctttgcgagtggcttatag
DBGET
integrated database retrieval system
