KEGG   Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139375920
Entry
139375920         CDS       T10872                                 
Name
(RefSeq) lysine-specific demethylase 4A-like
  KO
K06709  [histone H3]-trimethyl-L-lysine9/36 demethylase [EC:1.14.11.66 1.14.11.69]
Organism
ocla  Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:ocla00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ocla03036]
    139375920
Enzymes [BR:ocla01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.66  [histone H3]-trimethyl-L-lysine9 demethylase
     139375920
    1.14.11.69  [histone H3]-trimethyl-L-lysine36 demethylase
     139375920
Chromosome and associated proteins [BR:ocla03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    139375920
SSDB
Motif
Pfam: JmjC zf-HC5HC2H_2 Tudor_2 PHD_2 zf-HC5HC2H JmjN PHD Tudor_5
Other DBs
NCBI-GeneID: 139375920
NCBI-ProteinID: XP_070973986
LinkDB
Position
20:complement(12656361..12691629)
AA seq 1167 aa
MSSDSGSQTPGSKGIMTFHPTAEEFQNFSRYIAYMENQGAHQAGLAKVVPPKDWRPRKSY
DDIDDLVIPAPIQQVVTGQSGLFTQSNIQKKPMTVREFRKTANSDKFCSPRYADIEELER
KYWKSVTFNSPIYGADVNGTLYDPDVTDWNIGKLNTILDTVEHVNGITIEGVNTPYLYFG
MWKTTFAWHTEDMDLYSINYLHFGASKSWYCVPPEQGKKMERLAQGFFPGSHQNCEAFLR
HKMTIISPSILRKYGIPFEKITQEPGEFMVTFPYSYHAGFNHGFNCAESTNFATERWIEY
GKQAMLCTCRKDMVKISMDLFVKKYQPDRYEQWLAGRDTGPIDHSRPTPEAKEFLGEEQG
KDCISQEPEVERKSPTPRIGTKRHWVCLDVPDKVVPKDEEEEYDKKARLGLTALGTGAED
CTDTVTPVELTSRGLPNLKTDPKKGNSSTSPAPQKVTIPSTSNHAATILAQPQSHRNGHL
PVVAPPARTGPSAQPVRKLGVASLLFHKTQSPKETMQVHSYARENQQPIHHTQLHVHSYA
REHLPRHLQLKAQLQSQVKAGQQESQVPFTKDEHIQAEAQSPRKGEQVETKAQTQGLRKW
QQPGEAQAQEEKPEAKAPSSPEPVQTQAHTRPTKRAEVKRDRWKQCLSPVQAELMLIKQT
NLNLSKPMILHPSKLTNLSPSKQTDCKSVKSKQYPLLRQLPKQHPLLSSSESHSDDDELY
VDMKDEPEEREEWAKPLAQLWQSRPYNPQAERSYNQRMGLQAPYCSICLLFHTYDQSQSS
SNPSYTVKGRRGGRQRSKPLIPEMCFSTTSDKTNSSSSGEGQLYTPHLEEDGTSLLVSCS
QCCVRVHASCYGVSVDQVSDDWMCARCEANALTEDCCLCSLRGGALQRANNDKWVHVLCS
LVVLEARFVNIADRSPVDLSYIPLARFQLKCFYCKRRVKRDVGCCVQCSHGRCTTAFHPT
CAQAAGQLMQPDDWPFIVHVTCYRHKSPVLPERNKAAMQELEVGQQVICKHKNGRYYQCE
VLELLTTATFYEVVFDDGSYSDNLFPEDIENRDCVKLGPPAVGDVVQVRWTDNLLYGAKF
VASHSILMYQMEFEDGSSLSAKREDVYSLDEELPKRVKSRMSKASDMRFDGIFTEEEVKQ
GSKRQRVINSRYREDYIEPLLYRVMME
NT seq 3504 nt   +upstreamnt  +downstreamnt
atgtcgtctgattcggggtcccagactcctggctccaaggggatcatgacctttcacccc
actgctgaggagttccagaacttcagccgctacattgcctacatggagaaccagggagca
catcaagccggcttggctaaagtcgtgccaccaaaggattggaggcccaggaagtcctat
gacgatatagatgacctggtgatcccagctcccatccagcaggtagtgacgggccagtca
ggcctgtttacccagtccaacatccagaagaagcccatgaccgtccgagagttccgtaag
acggccaacagtgacaagttctgcagtcctcgctacgccgacattgaggagctggagagg
aagtactggaagagcgtgacctttaactcgcccatctacggtgcagatgtgaacggaaca
ctttacgaccctgatgtgactgattggaacatcggcaaactgaacaccatcctggacacg
gtggagcatgtgaatggcatcaccatcgagggggtgaacacgccctacctgtactttggc
atgtggaagaccaccttcgcctggcacactgaagacatggatctctacagtatcaactac
ctccactttggagcgtccaagtcctggtactgtgttcctccagagcaggggaaaaaaatg
gagcgtttggctcaagggttttttcctggtagccaccaaaattgcgaagccttcctgagg
cacaagatgaccatcatctcgccctccatattaaggaaatatggcattccatttgagaag
atcactcaggagcctggtgagttcatggtgacatttccctatagctaccacgccggattc
aaccatggcttcaactgtgccgagtccaccaactttgccaccgaaaggtggattgagtat
ggaaagcaagccatgctgtgtacgtgcaggaaggacatggtgaagatctccatggatctg
ttcgtgaagaagtaccagccagaccgctacgagcagtggctcgcgggacgggacacgggc
cccatcgaccactcacggcccaccccagaggccaaggagttcctgggggaggagcagggg
aaagactgcatttcccaggagccagaggtggagagaaagagcccaacaccgaggataggg
accaagaggcactgggtgtgtctggatgtacctgacaaggtggtccctaaagatgaagaa
gaggagtatgacaagaaggccagactaggcctcaccgctctgggcacgggagcagaggac
tgcacagatacagtcacaccagtggagctcacctcgaggggactgcctaatttaaagacg
gaccctaagaagggcaacagcagcacaagcccggctccacaaaaagtcaccatcccctcc
accagcaatcacgcagcgaccattttggctcaaccccagtcgcacagaaacggccacctc
ccagtagtggctcccccggccaggaccggtccttccgctcagcctgtccgaaagctgggg
gtggccagcctcctcttccacaagacccagagccccaaggagaccatgcaggtccacagc
tacgcccgtgagaaccagcagccgattcaccacacccagctccacgtgcacagttatgcc
agggagcacctgccacggcaccttcaactcaaggcccagctccagtcccaagtcaaagcc
gggcagcaggagtcccaggtcccattcaccaaagatgagcatatccaggccgaagcacag
agtcccagaaagggagaacaggttgaaacaaaggcccagacccaaggcctcagaaagtgg
cagcagccaggcgaggcccaggctcaggaggagaagcccgaagctaaggcccctagcagc
ccggagcctgtccaaacccaagcacataccaggccaaccaagagggcagaggtcaagagg
gacaggtggaagcaatgtctttccccagtgcaggcggagttaatgttaatcaagcagaca
aacttaaacttaagtaagccgatgattttacatccaagtaaactgactaacttaagtcca
agtaagcagacggactgcaagagcgtgaagagcaaacaatatcctctcctccgccagctg
cccaaacagcacccactcctcagctccagtgaaagccacagtgatgatgatgagctgtat
gttgatatgaaggatgaaccagaggagagggaggagtgggccaagcccctggcccagctg
tggcagagccgaccttacaacccccaggcggagagatcgtacaaccagcgcatgggcctg
caggccccctactgctccatctgcctgctcttccacacatacgaccagtcgcagtcgagc
agcaatcccagctacactgtaaaaggccggcgcgggggcagacagaggtccaagcccctg
atcccggagatgtgtttcagcaccaccagtgacaagaccaacagcagcagcagcggcgag
ggccaactctacacccctcacctggaggaggacggcaccagcctgctggtcagctgttcc
cagtgctgcgtccgcgtccacgccagttgctatggagtgtctgttgaccaagtgtcagac
gattggatgtgtgctcgctgtgaagccaacgctttgactgaggactgctgcctgtgttca
ctgcgagggggagctctacagagagccaacaacgacaagtgggtgcacgtgctgtgttcg
ctcgtggtcctggaggcgcgcttcgtgaacatcgccgaccgcagtcccgtggacctcagt
tacatccctctggccaggttccagctgaagtgtttctactgtaagcgacgggtgaagagg
gatgttggctgctgtgttcagtgttcccatggccgctgcaccactgccttccaccccacc
tgcgcccaggcggctggccagctcatgcagcctgatgactggcccttcatcgtccacgtc
acctgctacaggcacaagtcacccgtcctaccagagcgtaataaggcggccatgcaagag
cttgaggtcggccagcaggttatctgtaagcataaaaatgggcgctactaccagtgtgag
gtgctggagctgctgaccaccgccaccttctacgaggtcgtcttcgacgacggctcctac
agtgacaacctcttccccgaggacatcgagaaccgggactgtgtcaagctgggccctcca
gcagtgggcgacgtggtgcaggtgcgctggacggacaatctgctgtacggggccaagttt
gtcgcatcgcactccatccttatgtaccagatggagtttgaggacgggtcgtcgttgtct
gccaagagggaagatgtctacagtctagacgaggagctgcccaaacgagtcaagtcccga
atgtccaaggcgtcagacatgcgcttcgatgggattttcacagaggaggaggttaagcag
ggctccaagagacagcgagtcatcaactcccgttacagagaggactacatcgagcctctc
ctatacagagttatgatggagtaa

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