Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139375927
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Entry
139375927 CDS
T10872
Name
(RefSeq) small conductance calcium-activated potassium channel protein 2-like
KO
K04942
potassium intermediate/small conductance calcium-activated channel subfamily N member 1
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ocla04040
]
139375927
Ion channels [BR:
ocla04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
139375927
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GFIT
Motif
Pfam:
SK_channel
CaMBD
Ion_trans_2
Ion_trans
DUF7310
Med4
DUF6775
Motif
Other DBs
NCBI-GeneID:
139375927
NCBI-ProteinID:
XP_070973996
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All DBs
Position
20:complement(12821133..12872693)
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AA seq
1004 aa
AA seq
DB search
MQVLVKPTNETSRLYSAGTDRNERVSELYKANEQPQQDSAFKGMRHRYAGAVYQHQIPDE
EQGSAQSRDPNPVSPVFSLPPPPPSFRERSTTTSHYQNHELPCLSQPSRRGIHACQPQHG
EPPPLTNYDIAQRPSHRVCEPDGQPAHLKQNLWAAVGSQPQSEQPVSQSCHCSFSEKANL
SHQRQPLTHPPQPSLSLPSPPTSSSLLFLQESNRGEHFQSSANYQQASIVEHCRGGEGGG
GYRDQKQLLQQHCQRLQHRDPSPEAIRANSQKGRTVNVCESIEANRRAFESQAQDLQQLQ
QQPLLRAQQQLLVGSSLPINYCANGSGEVCRNNQASLLQQHQQQQDALGLCPQRPQHCDQ
DCNKSGRTNQANQSQQHCRDSRVNPPTQPYGGNSSATGSSSKSSPNYGSSYHLWPESPHK
EEERILIDHYQATTEQKKLSHAGSKPCLSESSGRLPQIAMNTCKYNGGVVRPLGSLASSR
RNLAELDSETQPLQTLHSSGLEVVVSKGNGEDPSKASNESLVRDGNGAPVKKNKDIGYRL
GHRRALFEKRKRLSDYALIFGMFGIVVMVTETELSWGVYGKESSYSFALKCLISLSTVIL
LGLIIMYHAREIQLFMVDNGADDWRIAMTYERIFFIVLELLVCAIHPIPGHYRFTWTARI
AFTYTPSTANADVDIILSIPMFLRLYLIGRVMLLHSKLFTDASSRSIGALNKINFNTRFV
MKTLMTICPGTVLLVFSISSWIIAAWTVRVCERYHDTQEVTSNFLGAMWLISITFLSIGY
GDMVPNTYCGKGVCLLTGIMGAGCTALVVAVVARKLELTKAEKHVHNFMMDTQLCKRVKN
TAANVLRETWLIYKHTKLVKKIDHAKVRKHQRKFLQAIHQLRSVKMEQRKLNDQANTLVD
LAKTQNVMYDLVSELQERSEELDKRIGMLEEKLDSVTGSLQALPCLISQAINQQQQEFLD
GFLHRFRPTSLGSERSERSERSWTSTARRRRSPSTAPHTSSDSG
NT seq
3015 nt
NT seq
+upstream
nt +downstream
nt
atgcaggtcctggtcaaacctaccaatgagacgagtcggctctattctgctgggactgat
cgcaatgaacgggtgtcggagctatacaaggcaaacgagcaaccacagcaagactcggct
tttaaggggatgcggcatcgatacgcgggagctgtctatcagcaccaaatccccgacgaa
gagcaaggcagcgcgcagagccgagacccaaacccagtctctccagttttcagtctgccg
ccccctcctccgtctttcagagagcgttcaactaccacctcacactaccagaaccacgaa
ctgccttgtctgagtcaaccctctcggagaggtatccatgcctgtcagccgcagcacggc
gaacccccacctctgacaaactacgacatcgcccagcgaccgtcacaccgggtctgtgaa
cccgacgggcagccagcgcacctgaagcagaacctttgggccgcagtcggctcgcagccg
cagtcggaacagcctgttagtcagagctgccactgcagtttttccgagaaggcgaacctt
tctcaccagcgccagcccctcactcacccgccgcagccctccctatctttgccgtcgccg
ccaacgtcgtcctctttgctgtttttgcaggaatctaatcgcggggaacatttccaaagc
agtgccaattaccaacaggcgagcatcgtggaacactgcaggggaggagaaggaggagga
gggtaccgagaccagaagcagttgttgcagcaacactgtcaaagactccaacacagggac
ccctcccctgaagcaatccgagcaaactcgcagaaagggcgcacagtaaatgtatgcgag
tcaatcgaggctaatcggcgagcattcgagtcccaggctcaggacctgcagcagctacag
caacagccactattgcgagctcaacaacagctactggtggggagcagcttgcctatcaac
tactgcgccaacggctcaggagaggtatgtaggaataaccaggcatcactgctgcaacag
catcagcagcagcaagacgcactggggctatgtccccagcgtccgcagcactgtgaccaa
gactgcaataagtcggggcgaactaaccaagccaatcagtcgcaacaacattgccgcgac
tcccgtgtaaacccaccaacgcagccgtacggggggaactcgtctgcgactggcagtagc
agcaagagcagccctaactacggctccagctatcacctgtggccggagagcccgcataag
gaagaagagcggatactaatcgatcattatcaggcaaccactgagcagaagaagctgagc
catgctggatccaagccctgcctctccgagagcagcggccgactccctcagatagccatg
aacacctgcaagtacaatggcggcgtagtgagaccactgggcagcctggcgtcgtcgcgg
cgcaacctagcagagctcgactcggagacgcagcccctccagacgttgcacagctccggc
ctggaggtggtggtatcaaagggcaacggcgaggaccccagcaaggcgtccaacgagagc
ctggtcagggacggaaacggtgctcctgtgaagaagaacaaggacattggctataggctc
ggccaccggagggcgctctttgagaaacggaagagactcagtgactacgccctcatcttt
ggaatgttcgggatcgtcgtcatggtgactgagactgaactgtcctggggagtttacggc
aaggaatcttcgtactcatttgcactgaaatgccttatcagcctttccactgttatattg
cttggtcttataataatgtaccatgcccgggaaatccagctgtttatggtggacaatggg
gcagacgactggaggatagccatgacgtacgagcgcatcttcttcatcgtgctggagctg
ctagtgtgcgccatccaccccatcccgggccattaccgcttcacgtggacggcgcggatc
gccttcacctacacgccgtcgacggccaacgccgacgtggacatcatcctctccatcccc
atgttcctcaggctctacctgatcggccgcgtcatgctgctgcacagcaagctcttcaca
gacgcctcgtcgcgcagcatcggcgccctcaacaagatcaacttcaacacgcgcttcgtc
atgaagacgctcatgaccatctgccccggcaccgtgctgctggtcttcagcatctcctcc
tggatcatcgccgcctggacggtgcgagtctgcgagaggtatcatgacacacaggaagtg
accagtaacttcctgggagccatgtggctcatctctattaccttcctctccattggctac
ggagacatggtacctaacacgtactgtgggaaaggcgtatgtctgcttacagggatcatg
ggagctggctgcactgcactggtggtcgccgtggtagccaggaagttggagttgaccaag
gctgagaagcatgtccacaacttcatgatggacacacaactctgcaaacgagtaaagaac
acagctgccaatgtactcagggaaacatggctcatctacaaacacactaagttggtcaag
aagatcgatcacgccaaggtgcggaaacaccagcgcaagtttctacaggccatccatcaa
ctgcgcagtgtgaagatggagcagaggaaactcaatgatcaggccaacacgctagtagac
ctggctaagacccagaacgtgatgtatgacctggtgtcggagctgcaggagcgtagcgag
gaactggacaagcggatcggcatgctagaggaaaagctggactcggtgacggggagccta
caggctctgccctgtctcatctcccaagccataaaccagcagcagcaggaattcctggac
ggcttcctacaccgcttccggcccacctcactgggctcagagcgctccgaacgttcagag
cgttcctggacctccaccgcccgccggcgtcgctcgccctcaacggcgccgcacacctcc
tctgacagcggttag
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