Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139375984
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Entry
139375984 CDS
T10872
Name
(RefSeq) polypyrimidine tract-binding protein 2-like isoform X1
KO
K14948
polypyrimidine tract-binding protein 2
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ocla03041
]
139375984
Spliceosome [BR:
ocla03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
139375984
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
RRM_Nup35
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
139375984
NCBI-ProteinID:
XP_070974090
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All DBs
Position
20:complement(15221706..15231595)
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AA seq
542 aa
AA seq
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MESIVSDVAVGMKRGSDDLSLYSTSPNSVTANGNDSSKKLRVEDRMESPPSRVLHIRKLP
SEVSETEVIALGIPFGKVTNILMLKGKNQAFLELGTEEAAVTMVNYYTAVMPQVRNVPVF
IQFSNHKELKTDSTLNQRAQAVLQAVSAVQDGGSPNSDNSTLDSVLAHAPSPVLRIIIDN
MFYPVTLDVLQQIFSKFGTVMKIITFTKNNQFQALLQFSEPVNAQQARLSLDGQNIYNSC
CTLRIDFSKLVNLNVKYNNDKSRDYTRPELPAGDGQPALDPAMAAAYNKDSSLLGTPSGM
GAHYSNGGGFQSSLSLSQGVGAINPMSAAAAAAAAAGRMVLSGHSGCSGVLLVSNLNEEM
VTPQSLFTLFGVYGDAQRVKILYNKKDSALIQMSDGNQAQLAMSHLNGQKMYGKIIRVTL
SKHQAVQLPREGLDDQGLTKDFTNSPLHRFKKPGSKNFQNIFPPSATLHLSNVPEDVTEE
DLRLLFSNAGGIVKAFKFFQGHKMALLQMSTVEEAIQALMDLHNYDMGSNHHLKVSFSKS
TI
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atggaaagcattgtcagtgatgttgcagttggcatgaagagaggctcagatgatttgagt
ctctacagcaccagccctaactctgtgactgctaacggcaatgacagcagtaaaaaactg
agagtggaggacaggatggagagtcccccttcccgcgtgctccacatcaggaagttgccc
agcgaggtgtcagagacagaggtcatcgctctgggcataccgttcggcaaggtcaccaac
atcctcatgctgaaaggaaaaaatcaggcgttcctggagttgggtacggaggaggcggct
gttaccatggtgaactactacacggcggtgatgcctcaggtccgcaacgtacccgtgttc
atccagttctctaaccacaaggagctgaagacagacagcactctcaaccagcgtgcacag
gctgtcctccaggccgtgtcggcagtgcaggatggtggctctcccaactctgacaacagt
acgctggacagtgttctagcccatgcccccagccctgtgctcaggataatcatcgacaac
atgttctaccccgtcactctggacgttctacagcagatcttctccaagtttggaacagtt
atgaagatcatcacgttcaccaagaacaaccagttccaggccctgctccagttcagcgaa
ccagtcaacgcccagcaagccagactgtccctggacggccagaacatctacaattcctgc
tgcacgctgcggatcgacttctccaagctggtcaacctgaacgtcaagtacaacaatgac
aagagccgggactacacccggcccgagctccctgccggtgacggccagcctgcactagac
cctgccatggccgccgcctataacaaggactcctccctgctcggtaccccctctggaatg
ggagcgcactactctaatggtggagggtttcagtcttctctctccctctcgcagggcgta
ggagccatcaatccaatgagtgctgcggcggcagcggcggcggctgcagggaggatggtg
ctctccggacactccggctgcagcggcgtgctcctggtcagcaacctgaacgaggagatg
gttacgccccaaagtctgtttaccctcttcggggtgtacggtgatgctcagcgcgtgaag
atcctctacaataagaaggacagtgctcttatccagatgtcagacgggaaccaggcccag
ctcgcgatgagccacctgaatggccagaagatgtacgggaagatcatccgtgtgacgctt
tccaagcaccaggcagtgcagctgcccagggaagggctggatgaccagggcctaaccaag
gacttcaccaactcccccctgcaccggttcaagaagcccggctccaagaattttcagaac
atcttccctccttccgccacgctccacctctccaacgtcccggaggatgtgacagaggag
gatctgcgactgctgttctctaatgctggtggcattgtgaaggccttcaagtttttccaa
ggccacaaaatggcgctactccagatgtccacggtggaggaggccatccaggccttaatg
gacctccacaactacgacatgggcagcaaccaccacctgaaggtctccttctccaagtca
accatctag
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