Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139376014
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Entry
139376014 CDS
T10872
Name
(RefSeq) eukaryotic translation initiation factor 4 gamma 1-like isoform X1
KO
K03260
translation initiation factor 4G
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ocla03019
]
139376014
03012 Translation factors [BR:
ocla03012
]
139376014
Messenger RNA biogenesis [BR:
ocla03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
139376014
mRNA cycle factors
Stress granule specific factors
139376014
Translation factors [BR:
ocla03012
]
Eukaryotic type
Initiation factors
eIF-4
139376014
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G
MA3
W2
eIF4G1-like_eIF4E-bd
Motif
Other DBs
NCBI-GeneID:
139376014
NCBI-ProteinID:
XP_070974159
LinkDB
All DBs
Position
20:16381242..16427198
Genome browser
AA seq
1850 aa
AA seq
DB search
MKALFCQSILQVPIETNGVDSRFTSRCQSVNLLANRLASQRHPDAELREMNKPPQPITGP
TSVPLPSPSPGLTQATYASGQPTSLVFATQTPQQMNSAPQPRQFATGPRALHQQGGYRAL
QPYYANRPTMPTSVTRVQTSSGPRPVGPTHIYQPGSQMMMIPGQQLSFAGSPQGYFIPPG
QYRAPYMPPSPQYPVTSGTAGFYPGTSPAEYPTYEPSLAARERRGGGRENGRLSLHGAPL
TSQRYPAGAYYPAQPQYSHTTPVQTAPVISPAQPQQQALPPQPPTHPPAPKRERVTIRIR
DPNQGGRDITEEIMSGGRSTSTPPSQSSTTEEEGPAQTNGEFTKPVTIVTRTDENAEPAD
CTVTAAETLPPVLSTPEPTTAAVPLEARQETDGQVAPLTEQVVSESHAPVAGMRPEVPIP
QREEQAPAFSPLTASTSPPPEEVQTPPPATTMAQASHTVGAGMTPAVKVVTPEGPSTQVE
PLAAPASVEKPLAQVAEEVVVVVVVEEKVEKVKKEPAVTINPEVVVAVVVIKEDTKPAPR
PVTPIATGDDFVPSLKLVAAVEAATKTESVVLPPAPKQKAMTEPISAPAHAATPPVSLAE
PAVAQKKVEQLPLSNGLPQEDPDEVDAPVVAIERIATVITEPAAPPPQETANPAAAAVEE
EEEKKEEEEEERKEEEQKEEDASPVPLSSSPSEDSSMQAAVSVPKKKRNMKELNKKEAIG
DMLDAFKEEEVAAPATEPSSSPPEPSPVAPTSLPPADAPDETWEEKEDKQNADTPPLKPG
DLKYQYKGEQWKPIDPEEKKRYDREFLLGCQFISASMNKPEGLPLITDVVLDKANKTPMR
PAEPGRNMNAGPDFTPAFMGNLGRQSSGGGGPRAPGRDHMGPPGPRRSQQGQRKEPRKII
TISSSLGGEVELNKAEKAWKPTVKKAVTRGRGAAPEDEESDDPEQAKTQELFKRVRSILN
KLTPQMFQQLMKQVTELTIDTEERLKGVIDLIFEKAISEPNFSVAYANMCRCLMGLKVPT
TDKPGVTVNFRKLLLNRCQKEFEKDQDDDVIFEAKQKEMEAAKEEEKAGLKATLEEAKDQ
ARRRSLGNIKFIGELFKLKMLTEAIMHDCIVKLLKNHDEESLECLCRLLSTIGKDLDFEK
AKPRMDQYFAQMDKIIKEKKTSSRIRFMLQDVIDLRRSGWVPRRGEQGPKTIDQIHKDAE
QEEHMQQVKVQQQLMSRNDGGGRGGGGGGRDGRGGDRGGRDQVGRGGQQVGRGSQPQDEG
WNTVPISTKNRPIDTSRLSKITKPGALDFSNQLLAPQLGGKGMWGSWGKGSSGGTTGAKP
ATGAEPAETGRPATGNRFSALQQSAPPASSSDADRRVPQRSSSSRDRDRFDRFERHDSSR
DERGGSRDARPPITKRSFSRETEERRGDSCTPTEPPVRRVASMTDDRDRGGSRDRGGSRD
RGGSRDRGGSRSRGGSGSRDRAPSKEVVVKRETAPTPPPDAPTKPAMTEEELEKKSSAII
EEYLHLNDMKEALQCVVELNSAPLLFVFVRNGLENTLERSAIARERMGLLLHQLIKAGTL
PTTEYYKGLQEILEVAEDMAIDIPHIWQYLSELINPMLHEGGIPMGQLFREISKPLIPLR
KAGVLLVHILNLLCKEMTHKKVGGMWMEAGLNWRDFLPEDEDVNKFVTEQKIEFTLGEKS
DGTNQKTTMSGEELSKQLDRLIQDKANNQRIRDWVQANLDEQQTSANQFVRSLMTSICQS
AVICENPYKVDVEQITQRAKLLQRYLSDEKKELQALYALQALMVHMEQPANLLRMFFDTL
YDEDVIKEEAFYRWESSKDPAEQTGKGVALKSVTAFFTWLRDAEEESDKD
NT seq
5553 nt
NT seq
+upstream
nt +downstream
nt
atgaaggccctgttctgtcagtccattttacaagttcccatcgaaacaaatggtgtagat
tcacgctttacttcaagatgccaatctgtcaatttactcgcaaatcggctggcaagtcag
cgccaccctgatgcagaactacgtgaaatgaacaaaccaccgcagcctataacgggaccc
acctctgtcccactcccctccccctcccctggcctgacacaggctacctatgcctctgga
cagcccacttcacttgtcttcgccacccaaactccccaacaaatgaattctgcaccgcag
ccacgacagtttgccaccgggccccgtgctttacaccaacagggtggatacagggcactg
cagccttattatgccaacaggcccaccatgcccaccagtgtcacccgggtccagaccagc
agtgggcctcgtccggttggtcccacccacatctaccagcctggctcccagatgatgatg
atccctggtcagcagctgtcctttgctggctcccctcagggctacttcatcccccctgga
cagtatcgggctccctacatgccaccaagtccacagtaccctgtgacaagtgggacagca
ggcttctacccaggcaccagcccggctgaataccccacctatgaaccctctctggctgcg
agggagaggagagggggcgggcgagagaatgggcgtctctctctccacggtgctcctctc
acctcccagcgctaccccgcaggtgcctactacccggcccagccccagtacagccacaca
acccctgtccagaccgcgcctgtcataagccctgcccagccccagcagcaggccttgccc
cctcagccgccgacccatccaccagcacccaagagggagcgcgtaacgatcagaatacga
gaccccaaccaagggggccgtgatatcacagaggagatcatgtccgggggaaggtccacc
tccacccccccttcacagtcctccaccacagaggaagaaggtcctgcccagaccaacggg
gaatttactaaacccgtcaccatcgtgacgagaacagatgaaaacgcagaacccgcggat
tgcacagtgacggccgccgaaaccctgcctccagtgttgtcaactccagagcctaccact
gcagctgtcccactggaggccagacaggaaaccgatggccaggttgccccgcttaccgaa
caggtcgtcagcgaatcacatgccccggtggcggggatgaggcccgaggtgcccatccca
caaagggaagagcaggcccctgccttctcccccctgacagcttctacctcccctccccct
gaagaggtacagactccaccccctgccaccaccatggctcaggccagccacacagtgggc
gctggtatgaccccagcggtgaaggtagtgaccccggaaggtccttccacacaggtagag
cctctggctgcaccagcatctgtggagaagcctcttgcccaggtagcggaggaagtagta
gtagtagtagtggtggaggagaaggtagaaaaggtcaagaaggagccggcagttaccatc
aatccagaggtagtagtggctgttgtggtcattaaagaagacactaaacccgctccacga
cctgtgacccccatcgcaacgggcgacgattttgttccgtccttgaagttggtggcggct
gtggaagcggccactaaaactgagagcgtggtgttgccgccagcgcccaaacagaaagcc
atgaccgagcccatttctgcccctgctcatgccgccactccccctgtctcgttggcggag
cctgctgtggcccaaaagaaggtggagcagcttcccctgtccaacggcctcccccaggag
gaccccgatgaggtagatgcccccgttgttgcaatagagcgcattgcaactgtaatcaca
gagcctgctgctcccccacctcaggaaactgctaaccctgcggctgctgccgtggaggag
gaggaggagaagaaagaagaagaggaggaggagcggaaagaagaggagcagaaagaggag
gatgcatccccagtgcccttgtccagcagcccttcagaggactcgtctatgcaagctgct
gtgtctgtgccaaagaagaagaggaacatgaaggagctgaataagaaggaagccatcgga
gacatgctggatgccttcaaagaggaggaggtggcggcacctgccaccgagccgtcgtct
tcaccgccggagcccagccctgtggccccgacctccttgccgcccgccgacgcaccagac
gagacgtgggaagagaaggaggacaagcagaacgccgacacacccccgctcaaaccgggc
gacctcaagtatcagtacaaaggagagcaatggaagcctatcgacccagaggagaagaag
aggtacgacagggagttcctgctgggttgccagttcattagtgccagcatgaacaagcct
gagggcctgcctctcatcacagacgttgtgctagataaggcgaataagacccccatgcgc
ccagcggagccgggtcgcaacatgaacgccgggccagacttcacccccgccttcatgggt
aacctgggtagacagtcctctgggggagggggaccacgggcccctggaagggaccacatg
ggacccccaggaccacggcgctcccagcagggccagcgcaaggagccccgcaagatcatc
acaatctcctcatcgctaggtggcgaagtggagctcaacaaggcggagaaggcctggaag
cccacagtgaagaaggctgtgacccggggccgaggtgccgcccccgaggatgaggagagc
gacgaccccgagcaggccaagacccaggagctgttcaagagggtccgctccatcctcaac
aagctgacccctcagatgttccagcaactgatgaaacaggtcacagagctgaccatcgac
acggaggagcggctgaagggagtgatcgacctgatctttgagaaggccatctccgagccc
aacttctctgtggcctacgcaaacatgtgccgctgccttatggggttgaaagtgcccacc
acagacaagccgggagtgactgtaaacttccgcaagctgctgctcaaccgctgtcagaaa
gagtttgagaaggaccaggatgatgacgtcatctttgaggccaaacagaaggagatggag
gctgccaaagaggaggagaaagctggtctgaaggcgacgctggaggaggccaaagaccag
gcgcggcggcggtcgctgggcaacatcaagttcatcggtgagctgttcaagctgaagatg
ctgacggaggccatcatgcacgactgcatcgtcaagctgctgaagaaccacgacgaggag
tcgctggagtgcctctgtagactgctgtccaccatcggcaaggacctggactttgagaaa
gccaagccccgtatggaccagtactttgcccagatggacaagatcatcaaggagaagaag
acctcatctaggatccgcttcatgctgcaggacgtcatcgatctcagacggagtggctgg
gtgccccggcggggggagcagggtcctaagaccattgaccagatccacaaggatgctgag
caggaggaacacatgcagcaggtcaaggttcagcagcagctcatgtcaaggaatgacgga
ggaggacgaggaggtggtggagggggaagagacgggagggggggggacagaggaggaagg
gatcaggtgggccgtgggggccagcaggtgggaaggggcagccagccccaggacgagggc
tggaacacagtgcccatctccaccaagaacagacccatcgataccagccggctcagcaag
atcactaagcctggtgctctggacttcagcaaccagcttcttgctccccagctcgggggt
aagggcatgtggggcagctggggaaagggcagcagtggaggcaccacaggagccaagcct
gccaccggagctgaaccagcggagactggccgtccggccaccggcaaccgtttctctgcc
ctgcagcagtcagctccaccagcatcctcctcagacgctgaccgcagggtaccccagagg
tccagctccagccgtgaccgggacaggtttgaccgcttcgagcggcacgacagcagtcgt
gacgagcgtggtggcagtcgcgacgcccgcccccctatcactaagcgcagcttcagccgt
gagacagaggagcgtaggggcgatagttgcacccctacggaaccccctgtccggcgcgta
gccagcatgactgacgacagagaccggggaggcagcagagaccggggaggcagcagagac
cggggaggcagcagagaccggggaggcagccgtagccggggaggcagcggtagccgggac
agggctcccagcaaggaggttgttgtgaagcgtgagacagcccccacccctccccccgat
gctccgaccaaaccggccatgaccgaggaggagctggagaagaagtccagtgccatcatc
gaggagtacctccatctcaatgacatgaaggaggcactgcagtgtgtagtggagctgaac
agcgccccgctgctctttgtgtttgtgcggaacggtctggagaacactctggagcgcagc
gccatcgccagagaacgcatgggcctgctgctgcaccagctcatcaaggctggcaccctg
cctacaacagagtactacaaagggctccaagagatcctggaggtggctgaggacatggcc
atagacatcccccacatctggcaatacctgtctgagctcatcaaccccatgctccacgag
ggaggcatccccatgggacagctcttcagagagatctccaagcccctgattcccctgcgt
aaggccggtgtgctgctggtgcacatcctcaacttactctgtaaagaaatgacccataag
aaggtgggcggtatgtggatggaggcggggctcaactggagagacttcttgccagaggac
gaggatgtcaacaagtttgtgactgaacagaaaattgagtttaccctgggggagaagtca
gacgggaccaatcagaagacaaccatgagtggggaggagcttagcaaacagcttgacaga
ctgatccaggacaaggctaacaaccaacgcatcagagactgggtccaggccaacctggac
gaacagcagacgtccgccaaccagtttgtgcgctctctgatgacatcaatttgccagtca
gccgttatatgtgagaacccatacaaggtggacgtggagcagattacccagagggcaaag
ctgctgcagcggtacctgagtgacgagaagaaggaactgcaggccctctatgccctccag
gccctcatggtgcacatggagcaaccggccaatctgctgcggatgttctttgacacgctt
tacgacgaggacgtgatcaaagaggaggccttttacaggtgggagtccagcaaagaccca
gccgagcagactggaaagggtgtggccctcaagtcggtcaccgccttcttcacctggctc
cgtgatgccgaagaagagtccgacaaagactaa
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