Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139376049
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Entry
139376049 CDS
T10872
Name
(RefSeq) brefeldin A-inhibited guanine nucleotide-exchange protein 1-like isoform X1
KO
K18442
brefeldin A-inhibited guanine nucleotide-exchange protein
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
139376049
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139376049
Membrane trafficking [BR:
ocla04131
]
Endosome - Golgi transport
Arf GTPases and associated proteins
Arf GTPase associated proteins
139376049
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec7
BIG2_C
Sec7-like_HUS
DCB
Sec7-like_HDS
Motif
Other DBs
NCBI-GeneID:
139376049
NCBI-ProteinID:
XP_070974281
LinkDB
All DBs
Position
20:19827577..19855157
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AA seq
1868 aa
AA seq
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MYESKTRNMFLNRALEKILADKEVKKAHHSQLRKACEVALEEIKEETEKLSPPPGDSNAD
SSTLPPVKSKDTIIEADKYFLPFELACQSKCPRIVITSLDCLQKLIAYGHLTGNAPDNTT
PGKRLIDRIIETICGCFQGPQTDQGVQLQIIKALLTSVTSQHIEIHEGTVLQAVRTCYNI
YLASKNLINQTTAKATLTQMLNVIFARMENQALQEARQMEKERLRQQHLQPSPVSQQGQE
PPASPHLEPPASPKQEQHTVSPPPQEEATQMPEQNTCGDLEPENGSVFCSAENEQTEADQ
ATAAAAQGFSPQDAEGVVEQEPFNYEEEQAQERVQTMLQEVVNTVVGECRESVCSATECV
DDMPVPVEEEGGLGSDTENVHANGIPGTPISASFTPSLTDDRISVSSNDTQESGATSGSS
PVAKFSHILQKDAFLVFRSLCKLSMKPLSDGPPDPKSHELRSKVLSLQLLLSILQNAGPV
FKTNEMFINAIKQYLCVALSKNGVSSVPEVFELSLSIFLTLLSHFKTHLKMQIEVFFKEI
FLYILETSTSSYDHKWMVIQSLTRICADAQSVVDIYVNYDCDLNAANIFERLVNYLSKIA
QGRVGHELGTTPAQELSLRKKGLECLVSILKCMVEWSNDQYVNPNSQTSLGQEKPVDQEP
SESTKPPESINRYGSLNSLDSSASSGIGSYSTLMSGTDNAEQFEVLKQQKEIIEQGIDLF
NKKPKRGIQYLQEQGMLGTTPEDLAQFLHQEERLDSTQVGEFIGDNERINKEVMYAYVDQ
MDFQGKDFVSALRLFLEGFRLPGEAQKIDRLMEKFAARYLECNQGQTEFASADTAYVLAY
SIIMLTTDLHSPQVKNKMTKEQYIKMNRGINDSKDLPEEYLSAIYDEIAGKKIAMNETKK
LTLKSSKQSVASEKQRRLLYNVEMEQMAKTAKALMEAVSHVQAPFTSATHLDHVRPMFKL
AWTPFLAAFSVGLQDCDDTEVASLCLEGIRCAIRIACIFTIQLERDAYVQALARFTLLTA
SSGISEMKQKNIDTIKTLITVAHTDGNYLGNSWHEILKCISQLELAQLIGTGVKARYISG
TVPAKGGLLASLREQASESSEYLGLVGGNVDRKQIASIQESIGETSSQSVVVAVDRIFTG
STRLDGNAIVDFVRWLCAVSMDELASPTHPRMFSLQKIVEISYYNMGRIRLQWSRIWEVI
GDHFNKVGCNSNEDVAIFAVDSLRQLSMKFLEKGELANFRFQKDFLRPFEHIMKKNRSPT
IRDMVVRCIAQMVNSQAGNIRSGWKNIFSVFHLAASDQDGSIVELAFQTTGYIVTNVFEK
HFPATIDSFQDAVKCLSEFACNASFPDTSMEAIRLIRHCAKYVSERPQAFKDYTSDDMNV
APEDRVWVRGWFPILFELSCIINRCKLDVRTRGLTVMFEVMKTYGHTYKKHWWQDLFRII
FRIFDNMKLPEQQTEKAEWMTTTCNHALYAICDVFTQYFEPLSDILLDDILSQLYWCVQQ
DNEQLARSGTNCLENVVILNGEKFSPEIWDKTCNCMLDIFKTTIPHALLTWRPAGGEGEL
MPQYDLSNLDSISQKSVDIQTRTEDQQSVCSVDRISLENQRQRTYSGSSGTHEDGPRARN
PAKMQEQRLFSALLIKCVVQLELIQTIDNMVFFPASSRKEDAENLAAAQRDTVDADVQLE
AQDQGMYHYLTSDQLFKLLDCLLESHRFAKAFNSNNEQRTVLWKAGFKGKSKPNLLKQET
NSLACGLRILFRMYTDDSRKAAWEEVQRRLLNVCGEALAYFLTLTSESHREAWTNLLLLF
LTKVVKISDDRFKAHASRYFPLLCEIMQFDLIPELRAVLRKFFLRIGNAFDISLLPSHRE
ELGPAGSQ
NT seq
5607 nt
NT seq
+upstream
nt +downstream
nt
atgtatgagagtaaaacgagaaacatgtttttaaaccgagcactggagaagattttagcc
gataaggaggtgaaaaaagctcaccattcccagttgcgcaaagcctgtgaggtggcacta
gaggaaattaaagaagaaacagagaagctgagtccccctcctggagacagcaatgctgat
tccagtaccctaccaccggtcaagtccaaggataccatcattgaagcagacaagtacttc
ctgccatttgagttagcctgccagtccaaatgtcctcgcattgtcatcacatctttagat
tgtttacagaaactcattgcttatggccacctcactggaaacgcaccagacaacaccacg
cctggtaagaggttgatcgatagaatcatcgagacgatatgtggctgctttcaaggccct
cagacagaccaaggtgttcagctacaaattataaaggctctgctgacatcggtgacctct
caacacatcgaaatccacgagggcacagtgctgcaggctgtcaggacttgctacaacatc
tacctggccagcaagaacctcatcaaccagaccacggccaaggccaccctcacacagatg
ctcaatgttatctttgcacgtatggagaaccaagcactccaggaggccagacagatggag
aaggagcgtctaagacagcagcatctgcagccgtcaccagtcagccaacaggggcaggag
cctcctgcctcccctcatctggagccccctgcctcccctaaacaggagcagcacaccgtc
tcacccccacctcaggaggaggccacccagatgcctgagcagaacacttgcggggacctg
gagcctgagaacggttctgtgttctgcagtgctgagaatgagcagacggaggcggaccaa
gctactgcagctgctgcacagggtttttctccgcaagatgctgaaggggttgttgagcaa
gaaccattcaactatgaggaggagcaggctcaagagagggtccagaccatgctgcaggaa
gttgtcaatacagttgttggagaatgcagggagagtgtgtgcagcgctacagagtgtgta
gacgatatgccagtcccggtggaggaggagggcgggctgggcagcgacacagagaacgtc
catgccaacggtatccctggcacacctatatctgccagcttcaccccctcactgacagat
gacaggatctctgtctcctccaacgacactcaggaatctggagctacgagtggttcgtct
cctgttgctaagttctcccatatcctccagaaggatgcctttctagttttccgctctctc
tgcaaactctctatgaagccactgtctgatggacctcctgatcctaaatctcacgagctg
cgctccaaggtgctgtccctccagctgctgttgtccatcctgcagaacgcggggcccgtc
ttcaagaccaacgagatgttcatcaacgccatcaagcagtacctgtgtgtggcgctgtct
aagaacggcgtctcctctgtccccgaggtcttcgagctctcgctctccatcttcctcacc
ctcctctcccacttcaagactcacctcaagatgcaaattgaggtgtttttcaaggagatc
ttcctctacatcctggagacatccaccagctcctatgatcataaatggatggtgatccag
agcctcaccaggatctgtgcagacgcccagagtgtggtggatatctatgtcaactacgac
tgtgacctgaacgctgctaatatatttgagaggctggtcaattacctgtcgaagatagca
cagggcagagtggggcatgagcttggcaccacacctgctcaggaactgagcttgaggaaa
aagggtctggagtgtctggtgtccattctcaagtgtatggtggagtggagcaatgatcag
tatgtgaaccctaactctcagaccagtctaggtcaggagaagcccgtggatcaggagccc
agtgagagcaccaaaccaccagagagtatcaaccgctacggcagcctcaactccctggac
tccagcgcctcctcaggcatcggctcctacagcaccctcatgtcaggaacggacaacgca
gagcagttcgaggtcctcaagcagcagaaagagatcatcgagcaaggcatcgacctgttc
aacaagaagccaaagaggggcatccagtacctgcaggagcaagggatgctgggtaccaca
ccagaggacctagcccagttcctgcaccaggaggagaggctagactctactcaggtgggt
gagttcatcggggataacgagcgcattaataaagaggtgatgtacgcctatgttgaccag
atggatttccaaggcaaggactttgtctcggctctgcgtctattcctggagggcttccgt
ctgcccggagaggcccagaagattgatcgtctcatggaaaaatttgcggccagatattta
gaatgtaaccaagggcaaactgagtttgctagtgcagatacggcctatgtcctggcttat
tcaatcattatgctgacaacagaccttcacagtccccaagtgaagaataaaatgacaaaa
gagcaatacatcaagatgaaccgaggaatcaacgacagcaaagatttacctgaggagtac
ctgtcagctatttacgatgaaatcgcagggaagaaaatagccatgaatgaaaccaaaaaa
ttaactctcaaatccagcaaacaaagtgtagccagtgagaagcagaggcgtctgctgtat
aatgtagagatggagcagatggctaagacagccaaggccctgatggaggcagtcagccac
gtccaggctcccttcaccagcgccacccacctagaccacgtcagacccatgttcaagttg
gcatggaccccattcttagccgcgttcagcgtgggtcttcaggactgtgatgacactgag
gtagcctctctgtgtctggaggggatccgctgtgccatcaggatagcctgcatcttcacc
atccagctagagcgtgatgcgtacgtccaggccctggcgcggttcaccctgctcacagcc
agctctggtatctctgagatgaagcagaagaatattgacaccatcaagactctcatcacc
gtcgcccacactgatggcaactacctgggcaactcctggcacgagatcctaaagtgtatc
agtcagttggagctggcacagcttatcgggacaggggtgaaggctcgctacatctcaggg
acagtcccggccaaagggggcctcctggccagcctgagagagcaggcctcagaaagctca
gagtacctgggactggttggagggaatgtggaccgtaaacaaatagccagtattcaggag
tccattggagagacaagctcccagagtgtcgtcgttgctgttgacaggatatttactggt
tctaccagactcgatggcaatgcaatagttgattttgtccggtggttgtgtgctgtatcc
atggacgagcttgcctcaccgacacatccgcgtatgttcagccttcagaagattgtggag
atttcctactacaacatgggccgcatcaggcttcagtggtctagaatttgggaagtcatc
ggggaccattttaataaggttggatgtaactccaatgaggatgtggctatatttgctgtt
gactccctgaggcagctgtctatgaaattcttagaaaaaggagagctcgccaacttccgt
ttccagaaggatttcttgaggcctttcgaacatatcatgaagaagaacaggtctcccacc
attcgagacatggtggtgaggtgtatagctcagatggtgaactcccaggctgggaacatc
cggtcagggtggaagaacatcttctcagtgttccacctggctgcctcggaccaggacggg
agcatcgtagaactggccttccagaccaccggctacatcgtcacgaatgtatttgagaag
cacttcccggccaccattgactctttccaggatgctgtgaagtgtctgtctgagtttgcc
tgcaacgcctccttccctgacaccagcatggaggccatccgcctcatacgccactgtgcc
aaatatgtgtctgagaggccacaggccttcaaagactacaccagcgatgacatgaatgta
gccccggaggaccgggtgtgggtgcgaggatggttccccatcctgtttgagctctcctgc
atcatcaaccggtgtaaactggacgtcaggacaaggggcttaactgtgatgtttgaggtg
atgaagacctatggtcacacctacaagaaacactggtggcaggatctgttcaggatcatc
tttaggatctttgacaacatgaaacttccagagcagcagactgagaaagctgaatggatg
accaccacctgtaaccatgcactttacgccatctgtgatgtcttcactcagtactttgag
cctctcagtgatattctcctggatgatatcctgtcccaactgtactggtgtgtacaacaa
gacaacgagcagctggcgcgctcagggaccaactgtctggaaaatgtagtcattctgaac
ggggagaagttcagcccagagatatgggacaaaacctgtaactgtatgctggacatcttc
aaaacaaccatccctcatgcgttactgacgtggagaccagctggaggagagggggagctg
atgccacagtacgacctctcaaacctggactccatatcccagaagtcagtggacattcag
actcgtacggaggaccagcagtcagtgtgcagtgtggacaggatctccctggagaaccag
aggcagaggacatacagcggctcctcgggcacacatgaggatggccccagggctaggaac
ccagccaagatgcaggagcagaggttattctcagcgctgctcattaagtgtgttgtgcag
ctggagctgatccagaccatagacaacatggtcttctttcccgccagcagcaggaaggag
gatgcagagaacctggctgctgcacagagagacacagtagatgcagatgtccagttggag
gcccaggaccagggaatgtaccactatctgacctcggatcagctcttcaaactgctggac
tgtctgctggaatcccaccgcttcgccaaggcctttaactccaacaacgagcagaggact
gtcctgtggaaggctggtttcaaggggaagtccaaacccaacctgttgaagcaggagacc
aacagtctggcctgtggcctccgcatcctgttccgcatgtacacagatgacagccgcaag
gcagcctgggaggaggtgcagagacgactgctcaatgtgtgtggggaggccctggcctac
ttcctcactctgacatcagagagccaccgggaagcctggaccaatctcctcctcctcttc
cttaccaaggttgtgaagatcagcgatgacaggttcaaggcccatgcatccaggtacttc
ccgcttctctgtgagatcatgcagtttgacctgattccagaactccgggccgtgctgcgt
aagttctttctccgcatcggcaacgccttcgacatctcactgctgcctagtcaccgagag
gagctaggtcctgctgggagccagtga
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