KEGG   Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139376161
Entry
139376161         CDS       T10872                                 
Name
(RefSeq) RING finger protein 11-like
  KO
K11980  E3 ubiquitin-protein ligase RNF11
Organism
ocla  Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:ocla00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ocla04121]
    139376161
Ubiquitin system [BR:ocla04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    139376161
SSDB
Motif
Pfam: zf-RING_2 zf-RING_11 zf-RING_UBOX zf-C3HC4_2 zf-C3HC4 zf-rbx1 zf-C3HC4_3 zf-RING_16 zf-RING_5 zf-RING_6 zf-C3H2C3 zf-C3HC4_4 Prok-RING_4 PHD_NSD zf_RING_Vps8
Other DBs
NCBI-GeneID: 139376161
NCBI-ProteinID: XP_070974514
LinkDB
Position
20:complement(28533190..28537926)
AA seq 151 aa
MGNCLKSPTSDDISLLHESDRGSYGEADADLEPPPPYQEQAHMPVYHPTPSQARLATQLT
EEEQVRIAQRIGLIQHLPRGVYDGGRDGSEKKIRECVICMMDFVYGDPIRFLPCMHIYHM
DCIDDWLMRSFTCPSCMEPVDAALLSTYETN
NT seq 456 nt   +upstreamnt  +downstreamnt
atgggcaattgtctcaaatcgccgacgtcggacgatatatctttgcttcacgagtctgac
agaggaagttatggtgaggcagacgcggatttggagccacctccgccttaccaggagcag
gctcacatgccggtgtaccaccccacccccagccaggcccgcctggccacccagctgact
gaggaggagcaggtccgtatcgcccagcgtatcggcctcatccagcatcttccccggggc
gtctatgacggaggccgggacggctctgagaaaaaaatcagagagtgtgtgatatgtatg
atggactttgtgtacggggaccccatccggttcctgccctgtatgcacatttaccacatg
gactgtatagatgactggctgatgaggtccttcacctgcccctcctgcatggagcctgtg
gatgctgccctgctttccacctacgagaccaactga

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