Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139376178
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Entry
139376178 CDS
T10872
Name
(RefSeq) synaptosomal-associated protein 47-like isoform X1
KO
K18212
synaptosomal-associated protein 47
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139376178
Membrane trafficking [BR:
ocla04131
]
SNARE
SNAP-25 (Qb,c)
SNAP-47
139376178
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Paralog
GFIT
Motif
Pfam:
PH_SNAP47_2nd
SNARE
EIN3_DNA-bd
Motif
Other DBs
NCBI-GeneID:
139376178
NCBI-ProteinID:
XP_070974552
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All DBs
Position
20:complement(30266001..30271707)
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AA seq
425 aa
AA seq
DB search
MTCPTRDIPIHSWPGSYYINSEKRWDAGTLSLTRTMLRFTSDQSKENLVGFRLSRIMEIK
MESSSFIFSTLTVLEHGNIKHWFGSLRPNRVVVYNVLEHFWRERLLSPSAEVQGAEAQPT
KGRELINLVAGAQRRLEDTGNVLHHQGEQFDNVMHGLGKIDSDLGVADRLLSELESPPWW
PFGKLPWKSQQDVKAEHAAREAACKLTGTGKHRVITSVPAIVSRGGDSDLKPGCLMVMVS
SLEVRDTNYVLLHRFQRDEVDDIRVHNPYEISVRQRFIGKPDICFRLLSAKMPEAMSVLE
IQYKKKVEYTSEYSAFLTTPATTPCDQDQGSIWNAAGLLQYQETEVPMTVPAGELSQVQV
HVLKPEVTQAEAQEIRQMLMQLKNLALEAETELERQDEALDILTSSTDRATMHIDKHTCR
MKRLL
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgacatgcccaacccgagacatccccatccacagctggccaggctcctactacatcaac
agtgagaagcgctgggatgccggcaccctgtccctgacccgcaccatgctgcgcttcacc
tcagaccagagcaaagagaacctggttggcttccgcctctcaaggatcatggagatcaag
atggagtcgtccagcttcatcttcagcactctgaccgtgttggagcatgggaatatcaag
cactggttcggctcgctgaggcccaaccgggtggtggtctacaatgtcctggagcatttc
tggagggagaggttgttgtccccatctgcagaggttcagggggctgaggcacagccgacc
aaggggagggagctgattaacctggttgcgggggctcagagacggctagaggacacaggg
aatgtcctccaccaccagggagagcagtttgataacgtcatgcatggcctaggcaagatt
gactcagatctgggcgtggcagacaggctactgtctgaactggagtctcccccttggtgg
ccttttggcaaactaccctggaagagtcagcaggatgtcaaggctgagcatgctgccaga
gaggctgcttgtaagttaacaggaacaggcaagcacagagtgatcaccagcgtaccagcc
atcgtctccagaggtggagactcagacctgaagcctggttgcttgatggtgatggtctcc
tcattagaagtccgagacacaaactatgtgctgctccaccgctttcagagggatgaggta
gatgacatccgggtgcacaatccgtatgagatcagtgtgaggcagaggttcatagggaag
ccagacatatgcttccgactcctgtcggctaagatgccggaggccatgtcagtgctagag
atacagtataagaagaaggtggagtacacaagtgagtactctgccttcctgacgacccca
gctacgaccccatgtgaccaggatcaaggttcaatatggaatgcagcaggcctgctgcag
taccaggagacagaggtccccatgacagtcccagcaggagagctgtcccaggtgcaggtg
catgtccttaagccagaggtcactcaggctgaggctcaggaaatccgacagatgctgatg
cagctgaaaaacctggctctggaggctgagactgagctggagaggcaagacgaggccctg
gatattctgaccagctctacggaccgggccactatgcacatagacaaacacacctgccgc
atgaagaggctgctgtag
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