Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139376199
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Entry
139376199 CDS
T10872
Name
(RefSeq) afadin- and alpha-actinin-binding protein-like isoform X1
KO
K06085
synovial sarcoma, X breakpoint 2 interacting protein
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04517
IgSF CAM signaling
ocla04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
139376199
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
139376199
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ocla03036
]
139376199
Chromosome and associated proteins [BR:
ocla03036
]
Eukaryotic type
Centrosome formation proteins
Pericentriolar materials (PCM)
Centriolar satellite
139376199
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ADIP
Ribosomal_L30_N
FAD-depend_C
Motif
Other DBs
NCBI-GeneID:
139376199
NCBI-ProteinID:
XP_070974591
LinkDB
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Position
20:complement(31486786..31498270)
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AA seq
615 aa
AA seq
DB search
MGDWWTTLTIEPSIENHEISSISRMMMSPSRHHNNLPTMQSSTMTLSKSSYNVLSAFCTE
ENVPQCTAYINQEMDSLGFSSACIEASSPEGSWGLNTVPALNMMYELLQMHCRSQRSLQE
QETEQLKSSSALEHLQMTNSRLKDQLELYKREKSGLLETERQLQLKNKTLQNCLKTEKDE
VQKLQSIIASRASQYSHDAKRKERESTKLKERLNQLLVDKRDKKLAIDVLNYLGRADGKR
SQWKTGKVEARHEGEMYKSLLSDYEGRQRALMLENVELKKVLQQMKWEMVSILSPRKSFS
NSRGDRGEDSLERASSDREEVGDCSKETLDQSCDHARDQSCEHAREQLTNSIRQQWRRLK
SHMERLDSQASLVQQSQQCAGKELVPRQIHEEEMERMRLEVQQCKDFIQTQQQLLQQQLN
SPCYDDETAALLNDCYTLEEKERLKEEWRLFDEQRRNFERERHNFTDAAIRLGHEKKAFE
EDRALWLKNQFLNMTSFVDRKRHSTSENPRALSVSSEPEMRIPSTSAMLTKSRTYYSTPK
AASAAGMPSTADLYRTLCLIPDRSSSSVGSSTQGSWQESNTIHSREDTPVRSKHRHGGGD
CCSIFSLGSEENSLN
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atgggagactggtggacgacactaaccatagagccatcaatagaaaaccatgagatctcc
agcatatcaagaatgatgatgtccccctcgaggcatcataacaaccttcctacaatgcag
tcctccaccatgacactgtccaagagctcctacaatgtgttaagtgccttctgcactgag
gagaatgttccccagtgtaccgcatacatcaatcaggagatggactctctgggtttctcc
tctgcctgtattgaggccagctcaccagagggaagctgggggctgaacacggtgccagcc
ctgaacatgatgtatgagctgctccagatgcactgccgcagccagcgcagcctgcaggag
caggagacagagcagctgaagagctccagtgccctggaacacctgcagatgaccaactct
agactcaaggatcagctggagctctacaaaagagagaagtcaggactgcttgagacagag
aggcagctgcaactcaaaaacaagactctgcagaactgcctgaaaacagaaaaagatgag
gtgcagaagctccagagcatcatcgccagcagagcctctcagtacagccatgatgccaag
aggaaggagcgggagagcaccaagctcaaagaacgcctcaaccagctactggtggacaag
agggataagaaactagcgattgatgtattgaactacttgggacgggctgatgggaagaga
agccaatggaagactggaaaggtggaggccagacatgagggggagatgtacaagtccctg
ctgagtgactacgagggtcgtcagagggctctgatgctggagaacgttgagctaaagaag
gtgctgcagcagatgaagtgggagatggtgtccattcttagtcctaggaaatccttctcc
aactccagaggagaccgtggggaagacagcctggaacgggccagctcggacagagaggag
gttggtgactgtagtaaggagaccctggatcagtcatgtgatcatgctagggaccagtcc
tgtgagcacgcccgggagcagctgaccaatagcatccgacagcagtggaggagactgaag
agccacatggagagactggacagccaggcctccctggtacagcagagccagcagtgtgct
ggtaaagagctggtccccagacagatccacgaggaggagatggagaggatgagactggag
gtccagcagtgtaaagacttcatccagacccagcagcaactcctacagcagcagctcaac
tctccctgctatgatgatgagactgctgctctgctgaatgactgctacactctggaggag
aaggagcgtctcaaagaggagtggaggctctttgacgagcagaggaggaactttgagagg
gagagacataactttactgacgctgccattcgcctcggccacgagaaaaaggcttttgag
gaagaccgcgccttgtggctcaagaatcaattcttgaacatgacttcgttcgtggaccgc
aaaagacattcaacgtcagaaaatcctcgtgccttgtcagttagtagtgaaccagagatg
aggatcccctccacctctgccatgctgaccaaatcccggacgtactactcaacgcctaaa
gctgcctctgctgctggcatgccctccacagctgatctctaccgtacattatgcctcata
ccagacaggagctcctcttctgtaggcagttcaacacaagggagctggcaggagtccaac
accatccacagtagagaagatactccggtcaggtcaaagcacagacacggaggtggagac
tgctgcagtatcttctctttagggtcagaggaaaacagcctcaactga
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