Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139376224
Help
Entry
139376224 CDS
T10872
Name
(RefSeq) nicastrin
KO
K06171
nicastrin
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
139376224
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nicastrin
Ncstrn_small
Peptidase_M28
Motif
Other DBs
NCBI-GeneID:
139376224
NCBI-ProteinID:
XP_070974638
LinkDB
All DBs
Position
20:complement(32326172..32344365)
Genome browser
AA seq
697 aa
AA seq
DB search
MGLESSKWAIIFLVCWLYKNVSCNSVEQKIYVELNNTVPCVRLLNATHQIGCQSSISGDT
GVIHVLESEADLEWPLSKGPNPPYMVLLESSLFTRSIMMKMKNESNRVAGVAVVVPNTSP
PEFSPHTTCPNENTGVYSDNYGPNLAHCNTTVWNPRGNGLSYEEFDFPVFSLKEDNETEF
IKQCYLDHNRVVNGSAPQYPLCAMQLFSHMHAVTNTPTCMRRNDINFSINPEMVCDPLGD
YNVWGSIRPYNDTVFGHKENESVVIAAARLDSRAFFWEVSTGAEGSVSGFVTLLAAAQAL
REVTHEAPPTRNILFAFFQGETFDYIGSSRMVYDMENGKFVIDLDNIHSVLEIGQVAVHS
GTNLFLHSDPVSRRNNTVNDEVKNLVNNLQSSTAGLSFLLVEPNVSQPLPPSSLQRFLRA
QPIPGIVLADHESAFNNRYYESFYDNAANLNLTYPSDLSPEEQLEFVTDTAKSLTDVATV
VARALYKQAGGDESLGNNIKADPKIVTQMLYGFLVSSNNSWFQAVMAPELKNILKPSPPE
YYVGVAMSSTPTRLVQYLLANLTGAATNLTQSQCQKPDELPNESRQMYSYLWVQGIVPPN
STERDSFCVRASVRLTKAVSPAFELGEYASKDYSTWTESRWKFIKARIFLVASRDLEMLT
LGVGVAVLFTSLLVTYFISTKADVLFSSTREPASAAY
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atgggtttggaatcgtcgaaatgggctataatattcttagtttgttggctttacaaaaat
gtgagctgtaactctgttgagcagaagatttatgtggagctgaataacactgtaccatgc
gttcgactgctcaatgctacacatcagattggctgccagtcctcgatatcaggtgataca
ggtgtgatccatgtcttggagtctgaggcagatctggaatggcctttgagcaaaggaccc
aatcctccttatatggttctgttggaatcatccctcttcaccaggtccatcatgatgaag
atgaagaatgaatccaacagggtagctggggttgcagtggtggtcccaaatactagccca
ccagagttctcgccacacacgacatgtcccaatgagaacacaggtgtatactcggacaac
tatggtcctaatttggcacactgtaacactactgtatggaaccctcgggggaacggtcta
tcctatgaggaatttgacttccctgtcttctccttgaaagaagacaacgaaacagagttc
atcaaacagtgctacttggaccataatcgtgtagtgaacggcagtgcccctcagtaccct
ctgtgtgccatgcagctcttctcccacatgcatgcagtcaccaatactccaacctgcatg
agacgcaacgacatcaactttagcatcaacccagagatggtgtgtgaccctctgggtgat
tataatgtttggggttccatccggccctataacgacaccgtcttcggccacaaggagaac
gagagcgttgttatagcagcagccaggctggacagcagggcatttttctgggaggtttca
actggagcagagggaagtgtctcagggtttgtcactctgcttgctgctgcccaggcactg
cgtgaagtcactcacgaggcccctcccacacggaatatcctctttgccttcttccaaggg
gaaacctttgactacattggcagctctcgaatggtttacgacatggagaacggcaagttt
gtgatagacttggacaatattcactcagtactagagattggtcaggtggccgtgcatagt
ggcaccaacctctttctccactcagaccctgtgtccaggaggaacaacactgtcaatgac
gaggttaagaatcttgtgaacaatttacagtcctccacggctgggctcagcttccttttg
gttgagcctaatgtctctcagccactcccgccctcctccctccagcgtttcctgcgagct
cagccaatcccagggattgtgcttgcagaccacgaatccgctttcaacaacaggtactat
gagagtttttacgacaacgctgctaacctgaacctgacttatccatctgacttgagtcca
gaggaacagctggagtttgtgactgatactgcaaagtcccttactgatgtggctacggtg
gttgcacgtgctctctacaagcaggccgggggagacgagtccctaggcaacaacatcaaa
gcagaccccaaaatagttacacagatgctgtatgggtttctggttagttccaacaacagt
tggtttcaggcagtgatggccccagaactaaagaacattctcaagcccagcccaccagag
tactatgttggtgttgccatgtcttccactccaactcgtctggtccagtacctcctggcc
aatttaactggagcagccaccaacctcacccagagtcagtgccagaagccagatgagctg
ccaaacgagagcagacagatgtactcctatctctgggttcagggcattgtcccacccaac
agcaccgagagggattctttctgcgtacgtgcatcggtacgcctgaccaaagcagtgtcc
cctgccttcgagctgggagagtatgcttccaaagactattccacgtggacagaatctcgg
tggaagttcatcaaagctcgaattttcctagtagcgagccgggacttggagatgctgacc
ttaggcgtgggagtggctgtgttgttcacatccctactggtgacatacttcatcagcacc
aaggcagatgtcctcttcagctccacgagggaacccgctagcgccgcctattga
DBGET
integrated database retrieval system
