Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139376305
Help
Entry
139376305 CDS
T10872
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139376305
Membrane trafficking [BR:
ocla04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
139376305
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
Ig_3
I-set
LRR_1
ig
LRR_14
LRR_EndoS
Ig_2
LRR_LRWD1
LRRNT
LRR_6
LRR_9
V-set
C2-set_2
Motif
Other DBs
NCBI-GeneID:
139376305
NCBI-ProteinID:
XP_070974785
LinkDB
All DBs
Position
20:complement(35608499..35669117)
Genome browser
AA seq
627 aa
AA seq
DB search
MTTRAMIGSLGPSVWSLTPWRWVSLWGPALLLVTIISLLPGSCQACPPRCECSAQIRSVS
CQRRRLTGIPEGIPTETRLLDLSRNRLRWVEMGDLAPYPHLEEVDLSENLIATLEPNAFA
NLQSLRVLQLRGNQLKLVPMGAFAKLGNLTTLDLSENKMVILLDYTFQDLRSLRHLEVGD
NDLVYISHKAFSGLLGLEDLTIEHCNLTSISGQTLSYLRSLVTLRLRHLSIAALEDHNFR
KLNNLRGLEIDNWPYLEYISPLSFQGLDLSWLSITNSNITSVPSSSFRNLIHLTHLNLSF
NPITTLEPWAFRELLRLKELIMVNTGLATVEPHSLGGLRQIRVLNFSSNELQTLEEGSFH
SVNSLETLRVDGNPLLCDCRLLWILQRRKTLNFDGRVPVCAGPEEVQGYSLSTFTDSALF
DHFTCQKPKIRNRKLQQVTAREGQPVSFLCSAVGEPAPNIMWISPQRRIITAKSNGRITV
LPGGTLEIRYAQVTDSGTYMCIASNAGGNDTYFAMLTVRGAPLDAASAFFVNRSLYGGEF
FNDTNLNSTRVFLKFTLDLTTILVSTAMGCITFLGVVLFCFLLLFAWSRGRGQRKNNFTV
ETPFRKAEGPAATGSAGGARKFNMKMI
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atgaccaccagggccatgattggctccctgggccccagtgtgtggtccctgacgccatgg
cggtgggtgagtctctgggggccggccctgctgctggttaccattatatccctgctgcca
ggtagttgccaggcgtgccccccacggtgcgagtgctcggcccagatccggtcagtctcg
tgccaacggcggcgcctcaccggcatcccagagggcatccctacagaaacccgcctcctg
gacctcagccggaaccggctccgctgggtcgaaatgggcgacctggcaccgtacccgcac
cttgaagaagtggacttgagtgagaatctcattgccacgctggagcccaatgcgttcgcc
aatctgcagagcctgcgggttttacagctgagggggaaccagctgaagctggtacccatg
ggggccttcgccaagctgggaaacctgaccacgctggatctgagtgagaacaagatggtg
attctgttggactacaccttccaggacctgaggagtctgagacacctggaggtgggagac
aacgacctggtctacatttctcataaggccttttctggtcttctggggctggaggacctg
accatcgagcactgcaacctgacgtccatctctggccagacactgtcctacctacgcagc
ctggtcactctgcgattaaggcacctcagcattgctgccctagaagaccacaacttccgc
aagcttaacaacctgcgggggctggagatcgataactggccatatctggagtacatctcc
ccgctcagcttccagggtctggacctgtcctggttgtccatcactaacagcaacatcacc
tccgtcccctcgtcctccttcaggaacctgatccacctcactcacctcaacctgtctttc
aaccccatcaccactctggagccctgggctttcagggagctgctgaggctcaaggagctg
atcatggtgaacacgggcctagctacggtggagccccactccctgggcggcctcagacag
atccgggtcctcaacttctcctccaacgaactccagaccctggaggagggatcgttccac
tctgtcaacagtctggagacgctgcgggtggacgggaacccgctgctgtgtgactgccgt
ctgttgtggatcctgcagagacgcaagaccctcaactttgacggcagggtgcccgtgtgc
gctgggccggaggaggtgcaggggtatagccttagcaccttcaccgactcagcgctcttc
gatcacttcacatgccagaagcccaagatacgcaaccgcaaacttcaacaggtgacggct
cgtgagggccagccagtgagtttcctctgcagtgccgtgggagagcccgcccccaacatc
atgtggatctcccctcagcgccgaataatcacagccaagagcaatggccgcatcactgtc
ctcccaggagggacgctagagatccgctatgcccaggtcaccgacagtggcacctacatg
tgcatcgccagcaacgccggcggcaacgacacctactttgccatgctcaccgtccggggc
gcgccgctggatgccgcgtcggcttttttcgtcaaccgctcgctgtacggtggcgagttc
ttcaacgacacaaacctgaacagcacgcgcgtcttcctcaagttcaccctggacctgacc
accatccttgtctccacggctatgggctgcatcaccttcctaggcgtggtgctcttctgt
ttcctgttgttgttcgcttggagcagggggcggggccagcgcaagaacaacttcacagtg
gagacccctttccggaaggccgaggggcctgcggccacgggtagtgccggaggagcccgg
aaattcaacatgaagatgatatga
DBGET
integrated database retrieval system
