Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139376328
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Entry
139376328 CDS
T10872
Name
(RefSeq) far upstream element-binding protein 3-like isoform X1
KO
K13210
far upstream element-binding protein
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ocla03019
]
139376328
03041 Spliceosome [BR:
ocla03041
]
139376328
Messenger RNA biogenesis [BR:
ocla03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
139376328
Spliceosome [BR:
ocla03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
139376328
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
KH_KhpA-B
FUBP_C
KH_Vigilin
KH_PNO1_2nd
Motif
Other DBs
NCBI-GeneID:
139376328
NCBI-ProteinID:
XP_070974823
LinkDB
All DBs
Position
20:38312115..38376022
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AA seq
542 aa
AA seq
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MMMMMAELVQGQASVAQPGMKADGFADALHRARQMAAKMGNEQIVDPSMYGYGGQKRSVE
DGGNQLGAMVHQRAVMTEDFKVPDRMVGFIIGRGGEQITRIQLESGCKIQIASESGGMMD
RACSLTGTPESIEQAKRMLGQIVERCRNGPGFHSEAESNSSVQEMLIPASKVGLVIGRGG
DTIKQLQERIGVKMMMIQDGPMPTGADKPLRITGDPYKVQQARELVIEIIRDKDQGDFRS
NRNDFASRLGGSTLDVAVPRFAVGIIIGRSGEMIKKIQADSGVRIQFKPDDGISPERIAQ
VMGQPDRCQHAVHLINELIQTAQERDGFGGSGGPRGRGRGRGDWGMGSPGGLQEVTYTIP
ADKCGLVIGKGGDTIKSINQQSGAHVELQRNPPHNTDPNVRIFSIRGTPQQMELARQLID
DKIGGSGIVSNNNFGFSPFTQGPATHQNCGSGAQTFMTGGWGTTYQTWQPQGQQDPSHNG
PQAGQMDYSKAWEQYYKKLGQTSQQQSSLPEYSAAVAEYYRQQGAYLWPGAQATQGPGLQ
EH
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atgatgatgatgatggcggagttggtgcagggacaggcctccgtggctcagcccggaatg
aaagctgacggcttcgccgacgctttacatcgggctcgacagatggcagcaaagatgggg
aatgagcagattgtagacccctccatgtatggctatgggggccagaagcgttcggtggaa
gatggaggtaaccagctgggagccatggtacatcaaagggctgtcatgacagaagacttt
aaagtgcctgatagaatggttggattcatcataggcagaggaggagaacaaattacaaga
atccagctggagtccgggtgtaagattcaaattgcgtctgagagtggaggtatgatggac
agagcctgctccctcactggaacccctgagagcattgagcaggccaagagaatgcttggt
cagatagtggaacgctgtcggaacggcccagggttccacagcgaggctgagagcaacagc
tcagtccaagagatgctcatcccagccagcaaagtgggcctggtcattggaaggggaggg
gacaccattaagcaactgcaggagagaataggagtgaagatgatgatgatccaggatggc
cccatgcccaccggggcggacaaacccctgagaatcactggggatccctacaaggtccag
caagctcgggagttggtgatcgagatcatccgcgacaaagaccagggagacttccgcagc
aaccgcaacgactttgcgtcaagattaggcggaagtactttggatgtagctgtgcccagg
ttcgcagtggggatcatcatcggcaggagtggcgagatgatcaagaagatccaggctgat
tctggagtgaggatccaattcaaaccagatgatggcatcagcccagagcgcatcgcccaa
gtgatgggccaaccagacaggtgtcagcatgctgtccatctcatcaacgagctcatccaa
acagcacaggagcgcgatggctttgggggctctggaggaccaagaggaaggggacgaggc
cgcggggactggggcatgggctcaccagggggactgcaggaggtcacctacacaataccc
gctgacaagtgtggtctggtgatcggcaaaggcggagataccatcaagagcatcaaccag
cagtctggagcccacgtggagctgcagaggaacccccctcacaacaccgaccccaatgtc
cgcatcttctccatcagaggcaccccgcaacagatggaactagcacgccagctcatcgat
gacaagatcggaggttcaggaatagtgagcaacaataattttggatttagccctttcact
caaggccctgcaactcatcaaaattgtggcagtggagcccagaccttcatgacaggagga
tgggggactacttatcaaacatggcagcctcaaggccagcaggaccccagtcacaatgga
ccccaagcaggccagatggactactctaaagcatgggagcagtattataaaaagctaggt
cagacatctcagcagcagagctcgctcccagaatacagcgcggctgtggcagagtattac
aggcagcagggagcatacctctggccgggtgcacaggcaacccagggcccaggtcttcag
gagcattag
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integrated database retrieval system
