Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139376359
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Entry
139376359 CDS
T10872
Name
(RefSeq) zinc finger E-box-binding homeobox 1-like isoform X1
KO
K09299
zinc finger homeobox protein 1
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ocla03000
]
139376359
Transcription factors [BR:
ocla03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ZF
139376359
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_jaz
zf-Di19
Homeodomain
zf-C2H2_15
zf-met
Motif
Other DBs
NCBI-GeneID:
139376359
NCBI-ProteinID:
XP_070974898
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All DBs
Position
20:complement(40891601..40984377)
Genome browser
AA seq
1319 aa
AA seq
DB search
MADGPRCKRRKQANPKRNNVTNYNNVVEGQSDSDDEDKLHIVEEDPDGDSTVPEDASVVL
TQNGTETHQDTWDEVKEDCGSEEEDEEEGEEGEEEEGGKDALVEEMLQLGDTAVIYPEAP
EDEQKSMPERRVPDENGTPDALSQLLTCPYCSRGYKRCTALKEHIKLRHEKSEDNFSCSQ
CSYTFAYRTQLDRHMTQHKTQHKEPVQRHMPQTTTTTGGNRKFMCTECSKAFKYKHHLKE
HLRIHSGEKPYECPNCKKRFSHSGSYSSHISSKKCVGMVPVNGTPRPVMKASQTPTTQNQ
LSGTAPVAPTRLLLRGEKTDGKPLQEQLPVNQIKSEPVEYEYKPVAVGPNGTAGTNGAAG
TNGTVFTSGMAVPQGTGLPQGMVQAVVLPTVGLMSPISINLSDLQNVLKVAMDGNVFRQV
LGTANGLVTSKQGVVGQAGQQVISAISLPGFVDQDGTTKIIINYTLEPSLAQQPSAPQLL
KKEPLTAPTTTNIQPVSKVTEKLTQDLSIIKTEQPDSESEKEMEKEEAQTEAEAEQSKEG
ETPKAQTGKTTCLLCDDCPGGLDALHMLQHCKPTNGEGGDGSPLDPYIAALLAEAGITPG
QPPLKNLLSLLKAYFALNAEPTEEELAKISDNVSLPVDIVKKWFEKMQSGQITVEPPGSS
SPLPSTGLGTETQAAQEKSGEQTEEQLASAQTQETSSSQPPNSSPASTSASPLVSASAPS
PLNLSSSGRVIVKTEEDSEGESQDLPLDLSLPKQPQSEPQVPHVPQEQPLNLTCLKKETS
HPQLQAQLQPQLPGFQTQLQSQLQPQLQAQIQAQLQPQLQAQLQPQLQGQLPGFQTQLQA
QGTTNTIYVTSPPQMATSSPVNIMTTQLVAITNQGSGVPCLRAISTGTTKRTILIPQLTY
TYTTKAGSNATGADGAQKTVILNGCQEEEKADTSSESVSAVEEQNDSDSAPPQKKMRRLE
SGMYACDLCDKIFQKSSSLLRHKYEHTGKRPHECGICNKAFKHKHHLIEHTRLHSGEKPY
RCDKCGKCFSHSGSYSQHMNHRYSYCKKEPQGDHQVGRRLRMTPEMSPQAEEQQSDSRPT
SPPSQLDSDERESEEELEEEEGEEEGMEAMSMDDIRVVQVGEDDEESEIYEVEDFEGERQ
EEEEEGSREEEAQQEEEEGQQEEEEAQQEEEEEEGSREEEAQQEEEEGQQENKEEGRREE
EEEGSREEEAHQKEGEEEEWRREEESREECVQQEKDVYEEEEEEEMEVQVMGDGEGEEGE
AEKETVVTEKETVVTEKETVVTEKAKETDNKEPHVDKENITETLENGQKETEENKMNSE
NT seq
3960 nt
NT seq
+upstream
nt +downstream
nt
atggcggatggccccaggtgtaagcgcagaaaacaggcgaacccgaagaggaataacgta
acaaattacaacaatgttgtggagggccagtcagactctgatgatgaggacaagctacac
atagtggaggaagaccctgatggtgacagcacggtgccagaagacgcctcagtagtatta
acccagaacggtacagagactcaccaagacacctgggatgaagtgaaggaggactgtggc
tctgaagaggaggatgaggaggaaggggaagagggggaggaggaggaggggggtaaggat
gccctggtagaggagatgctacagttgggggatacagcggtcatctaccccgaagctcca
gaggacgagcagaagagcatgcctgagagacgggtcccagacgagaatggcacgccagac
gctctttcccagctcctgacctgcccatactgctcgcggggctacaagcgctgcactgcc
ctgaaggagcacatcaagctgcgccacgagaagagtgaggacaacttcagctgctcccag
tgcagctacacattcgcctaccgcacacagctggaccgtcatatgacccaacacaagact
caacacaaggaacctgtacagcgccacatgccccaaaccacgacaacaacaggggggaat
aggaagttcatgtgtacagagtgttccaaggcttttaaatacaagcaccacctgaaggag
cacctgcgtattcacagcggagagaagccatacgagtgccccaactgtaagaagcgattt
tcccactccgggtcctacagctcccacatcagcagtaagaagtgtgttggcatggtgcct
gtcaacggtaccccccgaccagtcatgaaggcctcccagacccccaccacccagaaccag
ctttccggcactgcccccgtagcccctacccgactgctcctccggggggagaagacagat
ggcaagccccttcaggagcagctccccgtcaaccagatcaaatcagagccggtggaatat
gagtacaagccggtggcggtagggcctaacgggacagcagggactaatggggcagcaggg
actaacgggacagtgtttaccagtggcatggcggtaccccagggcacggggctgccacag
ggcatggtccaggcggtggtactgcccaccgttggtttgatgtctcctatcagtattaat
ctcagcgacctgcagaacgtactcaaggtggccatggatgggaatgtgtttcgccaggtg
ctggggacggccaacgggctggtgacgtccaagcagggggtggtggggcaggctgggcag
caggtcatctcagccatcagcctccctggcttcgtggaccaagacggaaccaccaagatc
attattaactacaccctggagcccagcttggcccaacagcccagcgcacctcagctcctc
aagaaggaacctctcactgcccccaccaccacaaacatacagccagtctccaaagtaaca
gagaaactcacccaggacctcagcatcatcaagaccgagcagcccgactctgagtctgag
aaggagatggagaaagaggaggctcagactgaggcagaggcagagcagagtaaggagggt
gaaacaccaaaggcccagacaggcaagacaacatgtctgctgtgtgatgactgtcctggt
ggtttggatgcactacacatgctccagcactgtaaacctaccaatggggaggggggtgac
ggcagccccctggacccctatatcgccgccctgctggcagaagcagggataacaccaggc
cagccccctctgaagaacctgctctccctcctcaaggcctactttgccttaaacgcagag
cccaccgaggaagagctggccaagatctctgacaacgtcagcttgcccgtggacatagtc
aagaaatggtttgagaagatgcagtccggtcagattactgtcgagccccctggttcctct
tcccctttaccttcaacaggtcttggcacagagacccaggcggcccaagagaagagcgga
gagcagacagaggagcaactcgcctcggcccaaacccaggagacatcatcttcccaacct
cccaacagttcccctgcctcgacctccgcctcgcccttggtctcagcctcggctccctca
ccactaaacctctcctccagcggccgggtcatcgtgaaaacggaggaggactcagagggc
gagtctcaagatcttcccctggacctgtcccttcccaagcagccccaatcagagccccag
gtcccccatgtcccccaggagcaacccctcaacctcacctgtttgaagaaggaaacgtcc
catccccagctccaggcccagctccaaccccagctcccagggttccaaacccagctccag
tcccagctccaaccccagctccaggcccagatccaggcccagctccaaccccagctccag
gcccagctccaaccccagctccagggccagctcccagggttccaaacccagctccaggct
cagggaaccaccaacaccatctacgtcacttcccccccgcagatggccacctccagcccg
gttaacatcatgaccacccagctagtagccatcaccaaccagggcagcggtgtgccctgt
ctcagggccatctccactggcaccaccaaacggactatcctcatcccccagcttacctac
acatacaccactaaagcaggcagcaacgccactggggccgacggagcccagaagaccgtc
atactcaacggctgccaggaggaggagaaggctgacaccagttcagagagcgtgtcggcg
gtagaggagcagaacgactcggactcagcccctccacagaagaagatgcgtcggctggag
agtggcatgtatgcctgtgacctatgtgacaagatcttccagaagagcagctccctgctc
aggcataaatacgaacacacaggaaaacgtccacacgagtgtggcatctgcaacaaagcc
ttcaaacacaagcaccacttgatagagcacacgcgtctgcactccggagagaagccctac
cggtgtgacaagtgtggcaagtgtttctcccactcgggctcctactcccagcacatgaac
caccgatactcatactgcaagaaggagccccaaggagatcatcaggtggggcgtcggctc
aggatgacccccgaaatgagcccccaagcagaggagcagcagtcagatagccggcccacc
tcccctccctcccaactggactcagatgagagggagagtgaggaggagctggaggaagag
gaaggagaggaggaaggcatggaagccatgagcatggacgacatacgggtggtgcaggtg
ggcgaggatgatgaagagagtgagatctacgaggtggaggactttgaaggggagaggcaa
gaggaggaggaagaagggagcagagaggaggaggcacagcaggaagaggaggagggacag
caggaagaggaggaggcacagcaggaagaggaggaggaagaagggagcagagaggaggag
gcacagcaggaagaggaggagggacagcaggaaaataaggaggaagggaggagagaggag
gaggaagaagggagtagagaggaggaggcacaccagaaggagggggaggaagaggaatgg
aggagagaggaagagagcagagaggagtgtgtacagcaggagaaagatgtgtatgaggaa
gaggaggaggaggagatggaggtacaggtgatgggagatggggagggggaggaaggagag
gcagagaaggaaactgttgtaacagagaaggaaactgtggtaacagagaaggaaactgtg
gtaacagagaaggctaaggaaacagataacaaagaaccgcatgtggacaaggagaacatt
acagaaacattagaaaatggacagaaagaaacagaggaaaacaagatgaacagtgaatga
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