Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139376377
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Entry
139376377 CDS
T10872
Name
(RefSeq) rho guanine nucleotide exchange factor 18-like isoform X1
KO
K21066
A-kinase anchor protein 18
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04530
Tight junction
Brite
Membrane trafficking [BR:
ocla04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
139376377
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
PH_16
Motif
Other DBs
NCBI-GeneID:
139376377
NCBI-ProteinID:
XP_070974992
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All DBs
Position
20:complement(42151406..42175241)
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AA seq
924 aa
AA seq
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MDDLDAVRGLSPRPPPPEDSVSLSSSSTDIINLEDGHYSALLAELEADAQDLEGESWSVS
VDQQYIKRLHKDAIKRQDVIYELIQTELYHMRTLKLLLSVYQYELRRNLQMEETRLDRMF
PQMDSLLHIHQHFLWCLRDCRDGQNHYTVTQLGAILINQFSGEMGERMKESYGDCCSHHT
DAVSFYKEQLQNNKKFQNLITKIGRLSIVRQLGVPECILLVTQRLAKYPFLVERILQNTD
ADSEEHDALAQALVLIRETISAVDSQVHDYERASSLRDIGRSLEPHSRGRLKDGRVFKRE
DLAVGSRNLLHEGTVNWQAANRWLKGSLCMKDAQIMQSLTEKLRMFADMAEAVTGLEDVA
NHSRLLLRSDDLDPQQGETLLKGAITEMENLQSLLLSGVTLRDPYPPPEDFLGSLGYSLR
PEYLRLLRGGLGLEGLRNLAALRRAETLGGYVCNPIPPMKNGNIQAGERPGSVAVQPLDS
GQHSNSDPQLQDLDQSESLEMSADESPAPASYWTSPCPNPSFPEAEFFDRVLLLSQKLYS
LLAIVSQQDSHIELQRASLSDREHPGRPRGNVLLEQEKQRNMEKQREEMANFHKLQTQHR
QEQARWEEEQACHQLQAEVLEAELRHREEECRRMKEKLAEERGELERWRETYQQDLERLR
ESTRTVEKQKERLDLQMKLKKNKTIAKPGSFNFNTQQAVPHSQSFRGDLPHSASFRGDLS
QLFRGDLIGGWTTGGDVTPIPASKVHIQPSLSLATAFLEPPPEVPLHRESISPAPPKAEV
PIHLISTTNQVVHKPGAVQQQIPTKLATLSSKGKEKSRKKGSHQRMHSAASIDMSQVVPI
RVTRKEGGSLRGKRTVSPHRSYQTDRFFSPPEPLSNAKHSQTLLSSSSMRMNSQSHFPPP
EPPHPPPFPKDIASKPTKERVIYL
NT seq
2775 nt
NT seq
+upstream
nt +downstream
nt
atggatgacctggatgctgtcagaggactttctcctcgaccccctcctcctgaggactct
gtgtccctctcctcgtccagcaccgacatcatcaacttagaagatggccactacagtgcc
ctgctagcggagttggaggctgatgctcaggacctagagggagagtcctggagtgtctct
gtggaccagcagtacataaagaggctacacaaagacgctataaagagacaagatgtcatc
tatgagttgatccagactgagctgtaccacatgcggaccttaaagctgctgctgagtgtg
taccagtatgagctgagacgcaacctacagatggaggagactaggctggacaggatgttc
cctcagatggacagcctgctgcatatccaccaacacttcctgtggtgtcttagagactgc
cgcgacggacagaatcactacacagtcacacagctgggagctatactcatcaaccagttt
tcaggtgagatgggagagaggatgaaggagagctatggagactgctgcagtcaccacaca
gatgctgtcagcttctacaaagaacagctacagaacaacaagaagttccagaacttgatt
acgaaaatcggtcggttgtccatcgtgcggcagttaggagtcccagaatgtattctgttg
gtgactcagcggctcgcaaagtacccctttctggtcgaacgcattctacagaacactgat
gctgacagtgaggagcacgatgccctggcccaagccctggttctgatcagagagaccatc
tctgctgtggactctcaggtccatgactatgagagggcctcttcgttgagagacataggc
agaagtttggaacctcattcccgcggcaggctgaaggatggaagggtgttcaagagagag
gacctggcagtggggtccagaaacctgctccatgaggggactgtcaactggcaggcagcc
aacagatggctgaaagggagtctatgtatgaaggatgcccagatcatgcagagcctgaca
gagaagctgcgtatgtttgctgacatggcggaggctgtaacagggctggaagatgtagct
aatcactctcgtctgctgctccgcagtgacgacttagacccccagcagggggagacactg
ctcaagggggccatcactgagatggagaatctgcagagccttctcctgtccggtgtgact
ctgagagacccctacccccctccagaggacttcctgggatcactgggatacagtttgaga
cccgaatatctacggctccttcgaggggggctaggccttgaggggctgcggaacctagcc
gcactcaggagagccgaaaccttagggggctatgtctgcaatcccataccccctatgaag
aatggtaatatacaggcgggagaacggccaggcagtgtggcggtacaacctctagacagc
ggtcagcattcaaactctgacccccagctacaggaccttgaccagtcagagagtctggaa
atgtcggctgatgagtcacctgcaccagcatcatactggacttctccatgcccaaatcca
tcctttcctgaagctgagttctttgacagagtgctgctgctctcacagaaactctacagt
ctgctggccatcgtgtcccagcaggacagccacatcgagttgcagcgtgcctcactgtca
gaccgtgagcatccgggccgtcctcgtggaaatgtgctcctggagcaggagaaacaacgt
aacatggagaaacagagagaggagatggccaacttccacaagctgcagacacagcacaga
caagaacaggctcgctgggaggaggagcaggcgtgccaccagttgcaggcggaggtcctg
gaggcagagctaagacacagagaggaggagtgtaggagaatgaaggagaagctagcagag
gagaggggggagctggagagatggagagaaacctaccaacaggatctggagaggctgaga
gagtctacaaggactgtggagaaacagaaggaacgcctggatttacagatgaagttgaag
aagaacaagaccattgccaaacctgggagttttaacttcaacactcagcaggctgtcccc
cactcccagtcgttccgaggggacctcccccactctgcttcctttcgaggggacctctcc
cagttgttccgaggggacctgattggtggttggaccacgggaggtgacgtgacccccatc
ccagcctctaaggtccacattcaacctagcctctctctagccacagctttcctggagcca
cccccagaggtgccccttcatagggagagcatcagccctgcgccccctaaagcggaggtt
cccattcacctgatcagcaccaccaaccaggtggtccacaagccaggggctgtgcagcag
cagatccccaccaagctggctaccctcagcagcaagggcaaggagaagagcagaaaaaag
ggatcgcaccagcgcatgcatagtgcagcatctatagacatgtctcaggtggtgccgatc
agagtgacaagaaaagagggcgggagtctgcgagggaagaggactgtgagtcctcacagg
agctaccaaacagatcgtttctttagtccaccagagcctctgtccaatgccaagcactcc
cagaccctattgtctagcagcagcatgaggatgaacagccagagccacttccctccaccc
gaacctccccatcctccacccttcccaaaagacatagcaagcaaaccaaccaaggaacgc
gtaatatacctgtaa
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