Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139376440
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Entry
139376440 CDS
T10872
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 24 isoform X1
KO
K15167
mediator of RNA polymerase II transcription subunit 24
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ocla03021
]
139376440
Transcription machinery [BR:
ocla03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Other mediators
139376440
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Med24_N
Motif
Other DBs
NCBI-GeneID:
139376440
NCBI-ProteinID:
XP_070975143
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All DBs
Position
20:46843147..46876883
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AA seq
986 aa
AA seq
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MKVVNLKQAILQAWKERWSDYQWAINIKKNFPKGATWDYLNLAEALMEQAMIGPSPNPLI
LSYLKYAISSQMVSYSSVLLAISKFDDFSRELCVKSLLEIMDMFCHRLSCHGKAEECIGL
CRALLGVVVWLLTGCACYCERLRELGPSASTEANLRACLERLRELVNSQKNRALVHIARL
EDQASWTNVEQALIKVTEGLNSLTNQTLRGKLEECISLVKSIPTILSEQSDPPHHSLFPS
VHAFIMLEGTMNLTGETQPLVEQLMMIKRMQRIPAPLFVLEIWKACFTGLIESPEGTEEL
KWTAFTFLKIPQVLLRLKKYPQGEKVQQDFMDDVNIAFEYLLKLTPLLDKADQRCNCDCL
SMLLQECNKLSLLSDSNTTNLTSKREYAPRLKTAENANIQPNPGLILRAEPTVTNILKTV
DADHSKSPEGLLGVLGHMLSGKSLDLLLAAAAATGKLKSFARKFIKLNEFPKHISGEGSK
SASVRALLFDISFLMLCHVVQTYGSEVILSDPSPSGETPFFETWLQTCMPEEGKTLNPDH
PCFRPESGKVESLVALLNNSSEMKLVQMKWHEICLSTPAAILEVLNAWENGVLSVEAVQK
ITDNIKGKVCSMAICAVAWLVAHVRMLGLDEREKPQTMIRQLMTPLYGENTLQFYNERVV
IMSSILENMCADVFQQTGLALRPPMEGQEPIPYRNLLSAKEPIHEALRKQFRSVLWKGWV
DSGALHLFESLLHTGGVFWFTNNLVKELLKETRQEWANRVVELLYSIFCLDTQQITLTLL
GHILPNLLTDSAHWHSLADPPGKALAKLSVWCALSSFSTHHKGQASARQRKRQREDIEDY
SSLFPLDDTQPSKLMRLLSSNEDEPVVLSSPGDRSMSTSLSASQLHTVNMRDPLNRVLAN
LFLLISSILGSKTAGPHTQFVQSFMEECVECLEQGSRGSILQFMPFTMVSELVKLPALAK
PRVVLGITDLTLPLGRRVAAKAISAL
NT seq
2961 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtggtcaatttgaaacaagccatcctccaggcttggaaggagcgctggagcgac
tatcaatgggccatcaacatcaaaaagaacttcccaaagggagccacatgggactacctc
aacttggcagaggctctcatggagcaggcaatgattggcccttctcccaacccgctcatc
ttgtcctacctcaagtatgccatcagttcccagatggtctcttattcaagtgttctctta
gccatcagtaagtttgatgacttctccagagagctctgcgtcaagtccctgttggagatc
atggacatgttctgccaccgtctcagctgccacgggaaggcggaggagtgcatcgggctg
tgccgggcccttctgggtgtggtagtgtggctcctgacgggctgcgcctgctactgcgag
aggctcagggagctggggccgtcggccagcacagaagccaacctgagggcctgcctggag
aggctaagggagttggtgaacagccagaagaacagggccctagtccacatcgctcgcctg
gaggaccaagcttcctggaccaatgtggagcaagctttgatcaaagtgacagaggggctc
aacagtctgaccaatcagacactgagaggcaagctggaggagtgcatttcattggtgaag
agtattcctacgattctgtctgaacagtcagaccccccgcaccactcgttgttcccgtcg
gtccacgccttcatcatgctggaaggaaccatgaacctgacaggggagactcagccactg
gtggagcagctcatgatgatcaagaggatgcagcgtatccctgcgccgctctttgtgttg
gagatctggaaggcgtgtttcactggcctcatcgagtcaccagagggcaccgaggagctc
aagtggaccgccttcaccttccttaagatcccccaggttctcctcaggctaaagaagtat
ccccagggtgagaaggtacagcaggacttcatggatgacgtgaacattgcctttgagtac
ctgctgaagctcacaccactgctggacaaggcggaccagagatgcaactgcgactgtcta
agtatgctactgcaggagtgcaacaagctgtctctcctgtcggactccaacacgaccaac
ctcacttctaaacgggagtatgctccacggctaaagactgcagaaaatgccaacatccag
cccaacccaggcctcatcctgcgagccgagcccactgtcaccaacatcctcaagacggtg
gacgcagaccactccaagtctccagagggccttctgggggtgctgggacacatgctctct
gggaagagcttggacctcctcctggctgctgccgcagccacgggaaagctcaagtccttc
gcccggaagttcatcaagctgaatgagtttccgaagcacatcagtggagaaggatccaag
tcggcctcagtgcgagccctgctgttcgacatctccttcctcatgctgtgtcacgtggtg
cagacctacggatcagaggtgatcctgtcggatcccagcccctcgggggagaccccgttc
tttgagacgtggctgcagacctgtatgccagaagagggcaagaccctgaacccagaccac
ccctgcttcaggcccgagtctggcaaggtggagagcctggtggccctcctcaacaactcc
tctgagatgaagctagttcagatgaagtggcacgagatttgcctcagcacgccggcagcc
atcttggaggtgttgaatgcctgggagaatggcgtgctctctgtggaggctgtacagaag
ataacagacaacatcaagggcaaggtatgcagcatggctatctgtgctgtggcctggctg
gtagcccatgtgaggatgctgggcctggatgagagggagaagccccagaccatgatccgc
cagctcatgaccccgctgtatggggaaaatactctgcagttctacaatgaacgggtggtg
atcatgagttccatcctggagaacatgtgtgctgacgtcttccagcagacaggcctggcc
ctgcggccgcccatggagggccaggagcccatcccctaccgcaacctgctctcggccaag
gagcccatccatgaggccctccgcaagcaattccgctcggtgctgtggaagggctgggtg
gacagcggcgcgctacacctctttgagagcctgctgcacacaggaggggtgttctggttc
accaacaacctggtcaaggagctgctgaaggagactcgccaagagtgggccaaccgggtg
gtggaactgctctacagcatcttctgcctggacacccagcagatcactctcaccctgctg
ggccacatcctgcccaacctgctcacagactcagcccactggcacagcctggcagacccg
cccggcaaggccttggccaagctgtctgtatggtgtgctctcagttccttctccactcac
cacaaaggccaggcctcagctcgacaacgcaagaggcaacgggaggatatcgaggactac
agtagcttgttccctctagatgacacgcagccttccaagctcatgcgtctgctgagctcc
aacgaggacgagccggtggtcctttctagtccaggtgaccggtccatgtccacctccctg
tcggcttcccagctccacacggtcaacatgagggaccctctcaaccgtgtcctagccaac
ctcttcctgctgatctcatccatcctgggctccaagacggcagggccacacacccagttc
gtgcagagcttcatggaggagtgtgtggagtgtctggagcagggcagtcgcggaagcatt
ctgcagttcatgcctttcaccatggtctcggagctggtgaaacttcctgcgctggccaag
cccagggtggtcttgggaatcacagacttgactctgcccctggggaggagggtggcagcc
aaggccatctcagccttatag
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