Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139376449
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Entry
139376449 CDS
T10872
Name
(RefSeq) semaphorin-4G-like
KO
K06521
semaphorin 4
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
ocla04090
]
139376449
CD molecules [BR:
ocla04090
]
Proteins
139376449
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Gene cluster
GFIT
Motif
Pfam:
Sema
PSI
Ig_3
PQQ_3
ig
Motif
Other DBs
NCBI-GeneID:
139376449
NCBI-ProteinID:
XP_070975165
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Position
20:48325912..48401879
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AA seq
895 aa
AA seq
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MVDHVTLLPPFLQLLLCSLSGVWGFPFGPVLDVTPRTTVLYQGLLGCQRFSSPSQNYSTL
LLEEDNGVLYVGARGALYALDTTNISTPGNLTIDWEASAEQKKQCLNKGKDNQTDCYNHI
RFLQRYNETHLYVCGTHAFRPLCAYIDVERFSFSSGFEEGRDRCPYDPAKGYTGLLVDGE
MFSASQYEFRSSPDVRRNFPFPTLRTEEAPTRWLLEADFVGSALLKESVNSSVGDDDKIY
FFFTERSQEQMAYPSQTRVARVARICKGDWGGQRTLQRKWTSFLKARLVCSVPDYELHLN
VLRSVFVLEGPDIHSTVFYGIFGLEWKNIKASAVCQYSFTDIQRAFEGPYMEVQDSKWRE
YTGKVPVPRPGSCMTDVHRSQGINSSRDLPDDVLAFARQHPLMSTQVHPIGEHPLLFKRS
VNYVKMAVHRVAALDRHVYTVLLLGTDEGWLHRAVEIGGQMHIIEELQLFVNPQPIDNMV
ISQAQESIYVGSNSAVLQVPLSSCQRYTSCFDCVFARDPFCGWDGALCVKISSRTNRSNL
TQDIQGGKRGCDNSTGVVHRRRTVMSGDDVLLHCDLRSNLATPRWTLDGHHLQGNGLDSG
LRVGTDGLLLICARPDQSGDYRCYAVENDVWVPVRMYTVTVQPDLPFPVGPTVVTDTLST
TTTTAPPSPSLPPSSPTEQPLPSLLAPLPPGPKFQTYRHMEAVYISLVAVLGGLCLVLTV
VLLYVSFCSRGPYQGRKYSQQELPELGAAAERKRSSHLELKTISSHCNGRQESEHGRCSL
SVSNMDDMGDGFLQIVPAEGSPGKSPPPPAPPLPMPPPLPSSEYVSSEYTNGMSATLPSV
LRKMNGNSYVLLRQTSDPEGSMSPLYHSFTEELNRILEKRKHTQPDPQETDESSV
NT seq
2688 nt
NT seq
+upstream
nt +downstream
nt
atggtggaccacgtcacacttctgccccccttcctacagctgctcctctgtagcctgtca
ggggtatgggggttccccttcggccctgtccttgacgtcacccccaggaccacggtgctc
taccaaggcctgctgggttgccagcggttcagcagcccatctcagaattacagcacactg
ctactggaggaggacaatggggtgctgtatgtaggggccaggggggctctctacgccctg
gacaccaccaacatctctacacctggcaatctcacgattgattgggaagcttcggcagag
cagaagaagcagtgtctcaacaaaggaaaagacaatcagacagattgttacaatcacatc
cgcttcctgcagaggtacaatgagactcacctgtacgtctgtggcacgcacgccttcagg
cccctctgtgcttacatagatgtggaacgcttcagtttctcctctggcttcgaagagggc
agggacaggtgtccctacgacccagccaagggctacaccggcctccttgtggacggtgag
atgttctcagcctcccagtatgagttccgcagctctccggatgtccgtcggaacttcccc
ttccccactctgaggacagaggaggcccccaccagatggctgctggaggcggactttgtg
ggctcggcgctgctgaaggagagtgtcaacagctcagtgggcgacgacgacaagatctac
ttcttcttcacagagaggagccaggagcagatggcctaccccagccagaccagggtggca
cgggtggcccgcatctgcaagggtgactgggggggccagaggaccttgcagaggaagtgg
acgtccttcctgaaggccaggctggtgtgctccgttcctgactacgagctccacctcaat
gtgctgcgtagtgtcttcgtactggagggcccagacatacacagcaccgtcttctacggg
atctttggcctggaatggaaaaatatcaaggcatctgcggtgtgccagtactccttcaca
gatattcagagggccttcgaggggccttacatggaggtgcaggattccaaatggagggaa
tatacagggaaggttccagtaccaaggcctggctcgtgtatgacagacgtgcacaggtcc
cagggcatcaactcgtcccgtgacctcccagatgacgtgttagcctttgcgaggcagcac
cccctgatgtccacccaggtccaccccataggagagcaccccctactgttcaagagaagt
gtcaattacgtaaagatggccgtgcacagggtggcagccctggaccgacacgtctacaca
gtgctcttgttgggaactgatgagggttggctgcacagggctgtggagataggaggtcaa
atgcacatcatagaggagctgcagctgtttgtgaaccctcagcctatagacaacatggtc
atctcgcaggcacaggaaagtatctatgttggctccaactctgcagtgctccaggtcccc
ttgtcctcctgccagcgctacacgtcctgttttgactgtgtgtttgcccgggaccccttc
tgtggctgggacggggcgctgtgtgtgaaaatttcctcacgcacaaacaggtccaatcta
acccaggatatacaaggggggaaaagaggctgtgacaacagcacaggagttgtccaccgc
aggcgtacagtgatgtctggggacgatgtcctcctccattgcgatctacgttccaacctg
gccactccacgctggaccctggatggccaccatctccagggcaatggcctcgactcgggc
cttcgtgtgggcactgacggcctgcttctcatctgcgcccggcccgaccagagcggagac
tatcgctgctacgccgtggagaacgacgtgtgggtaccagtgaggatgtacaccgtgacg
gtgcaacctgacctgcctttccctgtggggccaacagtcgtgacggacactttatcaacc
accaccactaccgccccaccaagcccttcccttccccccagcagccccaccgagcagccc
ctgccctccctgctggctcccctcccccctggacccaagttccagacctacaggcacatg
gaggccgtgtatatctccctggtggccgtgctgggggggctgtgcctggtgctgaccgta
gtgctgctctacgtcagcttctgcagccgggggccataccagggccgcaagtactcccag
caggagctgcccgagttgggggccgcagccgagaggaagaggagctcacacctggagctc
aagaccatctccagccactgcaacggcaggcaggaaagcgagcacggacgctgctccctg
tcggtatccaacatggacgacatgggcgatggcttcctccagatcgtgcccgcagaagga
tctccagggaaatcgccgccccctcccgctccgccgctcccaatgccaccacccctgccc
tcctcggagtacgtgtcgtcagagtataccaacgggatgtcggcgacattacccagcgtc
ctacgcaagatgaacggcaacagctacgtgctgctgaggcagacgtcggacccagagggg
agcatgtctcccctctaccactcgttcaccgaagagctcaaccgcatcctggagaagagg
aagcacacgcaaccggacccccaggagacagacgagagctctgtctag
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