Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139376457
Help
Entry
139376457 CDS
T10872
Name
(RefSeq) netrin-3-like
KO
K06843
netrin 1
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
139376457
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
ocla00536
]
139376457
Glycosaminoglycan binding proteins [BR:
ocla00536
]
Heparan sulfate / Heparin
Axon guidance molecules
139376457
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Laminin_N
NTR
EGF_laminin
EGF_LMN_ATRN
F5_F8_type_C
BNR_6
Motif
Other DBs
NCBI-GeneID:
139376457
NCBI-ProteinID:
XP_070975174
LinkDB
All DBs
Position
20:complement(49320520..49417143)
Genome browser
AA seq
644 aa
AA seq
DB search
MREAWRCLLGLCLLARSASPASPHGSANPFAGQQIPPDPCYDDAGTARRCIPEFINAAFG
KEVAVSSVCGWPTSSRSCSMVEHGEERPSVRTCQICDAADPWRAHPPSYLTDLNSAHNLT
CWQSENLHTSPNNVNLTLSLGKKFEITYVSLQFCSPRPESLAIYKSMDYGKSWTPYQYYS
SQCRRMYNRPNKAAITKQNEQEALCTDGHTDLYPLSGGLIAFSTLDGRPSGKDFDNSPVL
QDWVSVTDIRVVFSRPQLPREIGTGEGAGIGGGGQPDEDPMVPSTPLPAYFYAVGDFQVG
GRCKCNGHASRCLKDKEGKLVCDCKHNTEGPECDHCKPFHCDRPWHRASAREANECLPCN
CNLHARRCRFNMELYKLSGRKSGGVCMNCRHNTAGRHCHYCKEGFYRDMAKPITHRRACK
ACDCHPVGAAGKTCNQTTGQCPCKDGVTGIACNRCAKGYQQSRSPVAPCIKIPVVNPTAM
VSSSTEEPADCESYCKPVKGNLKINMKKYCKKDYAVQVNVLDMETVGDWAKFSVSVVSVY
KSRGEPLKRGDNVLWIHMKDLACKCPKIQMSKRFLVMGTSETVPGGSVPGGPRAGPGAIG
ATAGAERIGLLADKNSLVIQWRDIWTRRLRKFQRKEKNGKCSKA
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgagggaagcctggaggtgcttgctgggactgtgtctcctggcacgctctgcctccccc
gcctccccccacggttccgccaacccctttgctgggcaacagatacccccagatccctgc
tacgatgatgcaggcaccgcccgccgctgcatccccgagttcatcaacgccgcctttggc
aaggaggtggccgtgtccagcgtgtgcggctggccgacgtcgtcgcgctcttgtagcatg
gtggagcacggtgaggagcggccttcagtgcgcacctgccagatctgcgacgcagcggac
ccatggcgtgcccacccgccctcctacctcaccgacctcaactcggcccacaacctcacc
tgctggcagtcggagaatctgcacacctcgccaaacaacgtcaacctcaccctgtcgctg
ggaaagaagtttgagatcacctacgtcagcttgcagttctgctcgccccgcccagagtca
ttggcaatctacaagagcatggactacggcaagagctggacgccttaccagtactattcg
tcccagtgccggcgcatgtacaaccggcctaacaaggcggccatcacaaaacagaatgag
caggaggccctttgtaccgatggccacactgacctctacccactttccggagggctcatt
gccttcagcactctggacgggcggccctccgggaaagactttgacaacagccctgtgctc
caggactgggtatcagtcaccgacatccgtgtggtcttcagccggccccagctgccccgc
gaaatagggacaggagaaggggcggggataggcgggggaggccagccggacgaggaccca
atggtaccgtccacacctctgccggcgtacttctacgcggtgggggacttccaggtgggc
gggaggtgtaagtgcaacgggcacgcctcacgctgcctcaaggacaaggagggcaagctg
gtgtgcgactgtaaacacaacacggaggggcccgagtgcgaccactgcaagcccttccac
tgcgaccggccgtggcatagggccagcgcccgtgaggccaacgagtgtttaccgtgcaac
tgcaacctgcacgcccggcgctgccgcttcaacatggagctgtacaagctgtcagggagg
aagagtggaggcgtgtgcatgaactgtcgccacaacacggccggacgccactgccactac
tgcaaggaaggcttctaccgggatatggccaagcccatcacacaccgccgcgcctgcaaa
gcctgtgactgccacccggtgggtgcggcagggaagacatgtaaccagacgacgggccag
tgcccctgtaaggacggcgtgacgggcatcgcctgcaaccgctgtgccaagggctaccag
cagagccgctcgcccgtggccccctgcatcaagatcccagtggtgaaccctacagccatg
gtcagcagcagcacagaggaaccggcagattgtgagtcatattgcaaaccagtgaaaggg
aatctgaagatcaacatgaagaaatactgcaagaaagactatgcggtgcaagtcaacgtg
ctggacatggagacggtgggcgactgggccaagttctctgtcagcgtggtgtctgtctac
aagagccgtggcgagccactcaaacggggcgacaacgtcctgtggattcacatgaaggac
ctggcttgcaagtgtccaaaaatccagatgagcaagcgcttcctggttatgggcactagc
gagaccgtgcccgggggttctgtgcctgggggtcccagagctggaccaggggccataggg
gccactgcaggagcagagcgaatagggctcctggccgataagaacagcctggtcatccaa
tggagagacatttggacacggcgcctccggaaattccagcgcaaagagaagaacggcaag
tgcagcaaagcatga
DBGET
integrated database retrieval system
