Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139376531
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Entry
139376531 CDS
T10872
Name
(RefSeq) HEAT repeat-containing protein 1 isoform X1
KO
K14550
U3 small nucleolar RNA-associated protein 10
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla03008
Ribosome biogenesis in eukaryotes
Brite
Ribosome biogenesis [BR:
ocla03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
139376531
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GFIT
Other DBs
NCBI-GeneID:
139376531
NCBI-ProteinID:
XP_070975327
LinkDB
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Position
20:55454442..55478421
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AA seq
2145 aa
AA seq
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MTSLAHQLKRLALPQNDPNLLTRREVASLLFDPKDASRMDRSTFFALGCTGLEELVGIEP
AFSEFQETLFSQASVGIERSVQSKEVNKKLDAGISLFLTRLSPYFLLKPAQKCIEWLVHR
FHIHLYNVDTLLACALPYHETKVFVRVIQLFNLKDPTNRWNWLEGLQKPGVPLARGTLIT
HCYKDLGFMDFICTLVTKSIKGYSGHSGNCAQLRVIFSFYASTIVPALDAVEKVSDTIIS
KLLPYVQKGLKSSLTDYKAATYMIVCQLAVKVVMEAQLVDTLALQISKSLCKEPVLPKEG
LGCLIVLLQNQKEGTVGPKSFGQLCAVTSLVPSLQAMAAVHDISPLLRYLLPHLVHAVVT
TGTDEMETEEPSESTRHGNLFESVLQGLPLSGGLDNTVAKMLLEEYLSKSRLSAEGVTSL
NQRMLPLVRLFESKYPGALYMVLEGHVGDLSSAEDKNLFHQFISLSMSSGKYQILGDSDT
SLVLSLKHPLPSVRHMAVEHLMGIVTSGQGGFDQAFLKEALLERMKDDIPEVVAATLKAL
ELYVDRLDPEDTVSCLLSLLQRVDLSNAGHWCPVLKEAVRVLDEPRLVEGNSDLKTCVIW
GLLPFLVVTSALPDSPDLQLATCVAQSTIISQHNLTQGWAHALKAVLERCSQPDFIGLAN
QHLISTLTKNLSNMDPFSKRNALEKLAGLVAVQRGSLRERAAFLVLSQTLLQGLGDMSET
QHLHTAQSVYSLLEPAILELAQKDMPTQQEGVSLSFSVGLGEYLQRLRAGQSMDTEYAVL
LVSLLRGLISNLKCHDTSFKGETWWNPEKLDTNTCCYLRLLCRLFDVLITGAGQGHMAAS
FKALMKLLFQVHLSDPLELFKFLSLVWGYGSNLGDQLDCKVNAILQTQALYVGRAILSAQ
PGKTLTLLASGSSPVVLSLLACLSSPVREVRRAATATLQTLAQVDSSPFHPIIDRLLKTT
EELTTGPTHLSQALGKLYEEAVTGTGKGKARDKKLLVGLEELLLGVQVANCPAYTAKTIL
RALGEVNGESVLSVLMPVLERLLEQSGPENPTVLKDEALLMQLVLGKYNEQAAPLVVKDQ
DCLELFIKALGTVSKPYPDIPCFQIIALEQITKAFYSALGDEKVQQRLLGVMFDLLVESR
SPVCAQTISSVFKGIAVDGELVANELAPAEKPKVTVSVQQTRRSKMLQRKAQDTPQAVPK
EGAVSWQRVTLILELLQHKKKLKRPQTLVPALFSLLSRCLETSTVERGNLEYTKQLILGC
LLNVCQKLSPDGGPVSKDVLDEDKFNVEVVVQCVRMSDMPQTHHHALLLLGSVAGIFPEK
VLHNIMPIFTFMGANIMRLDDTYSFQVINKTVRTVIPALIKANDSGDGESTAHMEAVVTR
IVHVFADALPHVPEHRRLPILSQLMTTLGPARFLWVLLLLMFKQHATQTNATDKDAALER
DVEFWISVCCEFEVEEQLISLIKILKYLMALPQDKEDGPVKRPTRGKGAEKEKAEELIFN
MEAHSSKELRHFKFLSVSFMAQLLAAGSFVGMIAACGDIVEDSLQKLQQSLLEEILCYIH
TVARCVEENTDKPTGKFWRALLNKAYDVLDKVNALLPTDTFITVMRGLMGNQLPSVRRKA
MELLNNKLQQKTQWQEEQVTVLLDLKGDLLAIVGRGHGKVMEEEQAINRQTALYSLKLLC
RSFGSDHKEAFVPVLNQAVEIVVSPEEEKNVMGSALLCIAEVASTLKALAIPQLPRLMPA
VLQSLTERKEVLSNEIYMLSAVTALQRVTETLPHFISPYLQDTLLQVARLTRVAEKATAA
PQLAVRLASLRTTMATKVPPRVLLPTLTKCYSKMVNSKQSQLGPLMSILKEHIGHMEKEQ
LTSHQSELTYFFLIALDFRAQHCQGDLEKTKEIEGYVIDCLLAMVMKLSEVSFRPLFFKL
FDWCKTESVAKDRLLTFYRLSDSIADRLKGLFVLFAGHLVKPFSDLLRQTNVTKTGEAFF
DTEDNIEKRCLLLEYILDCLHKICLYDTQRFVSKERADSLMTPLVDQLENTLGGEEVYQT
RVTKHLVPCVGQFCVAVGDDTLWKTLNYQILLKTRHSSSKVRFSALLMLLELASKLRENY
MVLLPETIPFLAELMEDECEEVEHQVQKVIHEMETILGEPLQSYF
NT seq
6438 nt
NT seq
+upstream
nt +downstream
nt
atgacatctttagcccaccagttgaaacgcctggctttgccacaaaatgaccccaatctg
ctcactcgtcgggaggttgcatccctactgtttgaccctaaagatgcctccagaatggat
agaagcaccttctttgcacttggatgcacagggctcgaggaactcgtgggcatcgagcct
gcattcagtgagttccaggagacactcttcagccaagcctcagtgggcatagagcgcagt
gtccagtccaaggaggtcaacaagaaactggacgcaggcatctccctgtttcttacacgc
ctgtccccatactttctactcaagcctgcccagaagtgcattgagtggcttgtacacagg
ttccacatccacctgtataatgtggacacactgcttgcctgtgccttgccctatcacgag
actaaagtgtttgtcagagtcattcagctctttaacttaaaggaccccactaaccgatgg
aattggcttgaggggctacagaaaccaggagttcctttggccagaggaaccctaatcact
cactgttacaaagacttgggcttcatggatttcatctgcaccctggtcacaaagtcaatc
aagggatattcaggacattctggcaactgtgcccagcttcgagtgattttctctttttat
gcctccactattgtaccggctttggatgctgtggagaaagtgtctgacacaatcatatcc
aagctgctgccttatgttcagaagggtttgaagtcctctttgacagactacaaggctgcc
acctacatgatagtgtgccagctggctgtgaaagtggtgatggaggcccagctggtggac
accctggccctgcagatcagcaagtcactgtgcaaggagcctgtcctgcccaaagagggc
ctgggctgcctcatcgtcctcctgcagaaccagaaggagggcactgtcggcccaaaatcc
tttggccagctgtgtgctgtgacttccttggtcccctccctccaggcaatggctgcagtt
catgacatcagtcccttattacgctacctgctgcctcacctggttcatgctgttgtcacc
accggcactgatgagatggagactgaggagccctcagagagcacccgccatgggaacctg
tttgagtctgtccttcaaggccttccactgtctggtggtcttgataacacagtagcaaag
atgctacttgaggaatacctctccaagagtcggctctctgctgagggtgtcacttccctc
aaccagcgcatgctgccattagtcagactgtttgagtcaaagtacccaggtgctctgtac
atggtcctggagggccatgtgggtgacctctctagcgcagaggacaagaacctcttccac
caattcatctccctgtccatgagcagcggcaagtaccagatcctcggggactctgacacc
tccctcgtgttgagcctaaagcacccgctcccctctgtgaggcacatggctgtggaacac
ctgatgggcattgtcacctcaggacaggggggttttgaccaggccttcctgaaggaggct
ctgctggagcgtatgaaggatgacatcccagaggtggtggctgcaaccttgaaggccctg
gagctctacgttgatcgcctggatccagaggacactgtgtcatgtctcctctcactgcta
caacgtgttgacctctcaaatgctggacactggtgtccagtgttgaaggaggcagtgagg
gttctggatgaacccagactggttgaagggaactctgaccttaagacttgtgtcatctgg
ggtcttttgccctttcttgtggtcacctcggccctgcccgactccccagacctccagctg
gccacctgtgtggcccagtccaccatcatatcccagcacaacctcactcagggctgggcc
catgcgctcaaggccgtgttggagaggtgttctcagccggacttcattgggttggccaac
cagcatctcatctcaacactgaccaagaacctgtctaacatggaccccttctccaaacgc
aatgctctggagaagctggctgggctggtagcagtccagcggggcagcctgagggagagg
gcagcgttcttggtgctgagccagaccttactgcaaggcctgggggacatgagtgagacc
cagcacctccacacagcccagagtgtctactccctgctggagcctgcaatactggaactc
gcccagaaagatatgcctacgcagcaggagggtgtgtctctctccttctctgtggggctg
ggagagtacctgcagaggctcagggcagggcaaagcatggatacagagtatgcggtgctg
ctggtgtcactgctcagagggctcatatccaacctgaagtgccatgacacttccttcaaa
ggtgagacatggtggaacccagagaagctggacaccaacacttgctgctacctccggttg
ctgtgtcgcctgtttgacgtcctcatcacaggggcaggccaggggcacatggcagccagc
ttcaaggccctgatgaagcttctctttcaggtccacctgagtgatcccctggagctcttc
aagttcctgagtctggtgtggggttacggcagtaacctaggagaccagctggactgtaag
gtcaatgccattttgcaaacccaggccctctatgtgggcagggccatcctcagcgcccag
ccagggaagaccctcacactgctggcatcaggctcatcaccagttgtgctgtccctgctg
gcctgtctgagctcccctgtccgggaggtgaggagggcagccacagccaccctccagaca
ctagcccaggtggatagctctcccttccaccccatcatagacaggctgctgaagaccacc
gaggagctcaccactggcccaactcacctcagccaggccctggggaagctctatgaggag
gctgtaacggggacagggaaaggcaaggcccgggacaagaagctgctggtggggttggag
gagctgctgctgggtgtccaggtggccaactgccctgcctacactgccaagaccatactg
agggctctgggagaggtcaatggagagtctgtgttgtctgtcctaatgcctgtcctggag
cgcctgctggagcagagcgggccagagaaccccactgtcctaaaggacgaggccctgctc
atgcagctggtcctggggaagtacaacgagcaggcagcccccctcgtggtgaaggaccag
gactgcctggagctcttcatcaaggccctaggcacggtgtctaaaccctaccctgatatc
ccctgctttcagatcatcgccctggaacagatcaccaaggcgttctactcagccctcgga
gatgagaaggtccagcagaggctcctgggggtgatgtttgacttgctggtggagagcagg
agtcctgtctgtgcccagaccatcagcagtgtcttcaaagggattgctgtggacggcgag
ctggtagctaacgagctagccccagcagagaagcccaaagtcactgtgtcagtacagcag
acccgcaggagcaagatgttgcagaggaaggcccaggacactcctcaggcagtgccgaaa
gagggcgctgtgtcctggcagagggtgactctcatcctggagctgctgcagcacaagaag
aagctgaagaggcctcagacgctggtgcccgctctcttcagcctgctctccaggtgtctg
gagacgtccaccgtggagcgaggcaacctagagtacaccaagcagcttatcctcggctgc
ctgctcaacgtctgccagaagctctcccctgacggaggacccgtcagcaaagatgtgctg
gatgaggacaagttcaacgtggaggttgtggtgcagtgtgtgaggatgtccgacatgccc
cagacccaccatcatgcactgctccttctgggaagcgtggctggtatcttccctgaaaaa
gtcctgcacaacatcatgcccatcttcaccttcatgggcgccaacatcatgcgtctggac
gacacctacagctttcaggtcatcaacaagaccgtccggacggtcatccctgccctcatc
aaggccaatgacagtggcgacggcgagtcaaccgctcacatggaggcggtggtgacacgc
atcgtgcacgtgttcgccgacgcactgccccacgtgcccgaacaccgccgtctgcccatc
ctgtcccagctgatgaccaccctggggcccgcccgcttcctctgggtcctactgctgctc
atgttcaagcagcacgctacccagaccaacgccacagataaggatgctgcgttggagagg
gacgtggagttctggatctcagtgtgctgtgagtttgaggtggaggaacagctcatctct
ctcataaaaatcctgaagtatctcatggctctgccacaggacaaagaggacggacctgtg
aagaggccaacacgtggcaagggagccgagaaggagaaggcagaggagctgatcttcaac
atggaggcccacagcagcaaagagctgcgccacttcaagttcctctcggtctccttcatg
gcccaactcttggccgctggcagctttgtgggaatgattgcggcgtgcggtgacatcgtg
gaggattctctgcagaagctacagcaaagtcttctggaggagatcctttgctacatccac
actgtggctcgctgtgtggaggagaacactgacaaaccaactggcaagttctggagagct
ctgctcaacaaggcctacgatgtcctggacaaagtgaacgccctgttgcccacggatacg
ttcatcacggtgatgcgaggcctaatgggtaaccaactgccgtctgtgaggcggaaggct
atggagctgctcaacaacaagctgcagcagaaaacccagtggcaggaggagcaggtgaca
gtgcttctggacctgaaaggcgacctgctggccattgtgggacgtggtcatggcaaagtc
atggaggaggagcaggccatcaacaggcagacagccctctacagcctcaagctgctgtgc
cgcagttttggctcggatcataaggaggcgtttgtaccggtgctgaaccaggccgtggag
atcgtggtgtcaccggaggaggagaagaacgtgatgggcagtgccctactgtgtatcgcc
gaggtggccagcactctgaaggccctcgccatcccacagctgcccaggctgatgccggcg
gtgctgcagtctctaaccgagagaaaagaggtgttgtctaatgagatctacatgttgagt
gccgtcacagccctgcaacgcgtcactgagaccctgcctcacttcatcagtccctacctg
caggacacactgcttcaggtggctcgactgacgcgggtggcagagaaggccaccgccgcc
ccacagctggccgtgcgactggcctccctcaggaccactatggccaccaaggtgcccccc
agggtcctgctgcccaccctcaccaagtgctacagcaagatggtgaactccaaacagagc
cagctgggtcccctgatgagcatcttgaaggagcacattggtcacatggagaaggagcag
ctgacctcccaccaatcagagcttacgtacttcttcctaattgcgctggacttccgggcc
caacactgccaaggtgatctggagaagaccaaggagattgagggctatgtgatcgactgt
ctcctcgccatggttatgaagctatctgaagtctccttcaggcccctgttcttcaaactc
tttgattggtgcaagactgagagcgtagccaaggaccgcctgctgaccttctaccgccta
tcggacagcatcgcagacaggctcaaggggctctttgtcctgtttgccggtcacctggtc
aagcccttttctgacctgctccgtcagaccaacgtcacaaagacaggtgaagccttcttt
gacacagaggacaacattgagaagcgttgcctgctgctggagtacatactggactgcctc
cataagatctgcctgtacgacacgcagcgcttcgtcagcaaggagagagccgactccctc
atgacccctctggtcgatcagttggagaataccctgggtggagaggaggtttaccagacc
agagtcaccaagcacctggtgccgtgcgtgggccagttctgcgttgccgtgggtgacgac
actctgtggaagaccctcaactaccagatcctgctgaagacgcgacacagctcttccaag
gtgcgtttctctgccctgctgatgctgctggaactggcttctaagctgagggagaactac
atggtcctgctaccagagaccattcccttcctggctgaactcatggaggacgaatgcgag
gaggtggagcatcaagtacagaaggtgatccacgagatggagaccatcttgggagagcct
cttcagagttacttctaa
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