Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139376539
Help
Entry
139376539 CDS
T10872
Name
(RefSeq) SUN domain-containing protein 1-like isoform X1
KO
K19347
SUN domain-containing protein 1/2
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
139376539
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ocla03036
]
139376539
Chromosome and associated proteins [BR:
ocla03036
]
Eukaryotic type
Centrosome formation proteins
LINC complex
139376539
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sad1_UNC
MRP
HTH_SUN2
Motif
Other DBs
NCBI-GeneID:
139376539
NCBI-ProteinID:
XP_070975334
LinkDB
All DBs
Position
20:complement(55429309..55454205)
Genome browser
AA seq
1069 aa
AA seq
DB search
MDHSKVNSRAPPPGNTGYTYSHSSSYSTTALDFEKEHRITPVLESPRMSRRSLRLHSTTG
LYGDDSLDSSLNHMYHSASFSAGGASRRDSKALKSRRSQQHSVSCSQSLLLTTPLKSQHG
SQQHNSSLHSVAASDASLLSSMLDKSCIQERTLVEGFWGLDEDSELKERTMTDSMCEANG
DINSAQTQTSMVNGSFCKDRTIHLDRNYALTAYSKHSSTAARSATNKQALTAPAASPPST
IYARDKSRKHRTGVLVSFSDTCVRVSRRAAASVASVFSLLLQSVLLLRSRKEGTGVLWSA
LDTCLNHSRRAAAFTVCVVTLLIQAAVLKTGSVGRKVVNGAHSSYCGSMNVNELGTEGKR
MNLNGALCDDCKGKQRVETRIVQSSSRVRRSHHVLGELWLATAYSGYLLSDQTLAYPHTL
EMNESSSTFLVPCFLLLGWSPGSSVLWAGQKAGSAVRSVMRRMLSVLWLAAVSPGKSVTG
AFWWLGTGWYHLATVMSLLNIFVLTRCLPKLLKLLLILLPFLLVLLALWHWGPSSLLSVL
PAINITEWRTAYSFSQTPLEPTKDSQPIMAQPPPAVSQPGSVLVSVDSERLARLEQRLAQ
LWEKVERGGRRQENQHREVLSLYQSVREQLDTQTDKDSMGLWVSGLLEERLLLLKRGMEK
DAALRRELSQEIGEQYVVQQQGQESRLAQLEVLLQTLTAKTEEVQRRQADTSSATPALPP
VPVQVNVGVDSESRDALLAEVQLLEATLGGIRQDLQGVMGCQGMCDRLDTLHETVSEQVS
AQVRTELRALFSRSEQVGDSQTGEKELPESLLQWLSERYVSGADVHASLTSLELSILQNV
TLQLEKSRARQETHSTETVTQTVMHTVGAAGAGMSEEHVQLIVKNALKLYSQDRTGLVDY
ALESGGGSILSTRCSETYETKTALMSLFGLPLWYFSQSPRVAIQPDVHPGNCWAFQGSHG
YLVIRLSMRIVPSAFSLEHIPKSLSPTGTISSAPRQFTVYGLDDEYQEEGKLLGSYTYQD
DEDALQTYPVTEENDKAYQIIEVRVLSNWGHPEYTCLYRIRVHGQPSVN
NT seq
3210 nt
NT seq
+upstream
nt +downstream
nt
atggaccattcaaaagtgaactcacgcgccccacccccagggaacactggctatacctac
tctcacagctccagctactctacaacagccctggactttgagaaggagcacaggatcacg
cccgtcttagagtctcccaggatgtctcggcggagcctgcgtctgcactccaccactggt
ctctatggcgacgacagcttggactcttctctcaaccacatgtaccacagcgcctccttc
agtgcaggaggagccagtcgcagagattccaaggcgttgaagagcaggaggtctcagcag
cactctgtctcctgctcccagtctctgctcctcaccacgccccttaagagccagcatggc
tcccagcagcacaacagcagcctgcacagcgtggccgccagcgacgcctccctgctctcc
tccatgctggacaagtcgtgtatccaggagcgcacactggtcgaaggcttctggggcttg
gatgaagactctgaactcaaagagcggaccatgacagacagtatgtgtgaggccaacgga
gacattaactctgcacagacccagacctccatggtcaacggaagcttctgtaaggaccgc
acgatccacctggacagaaattacgcgctcactgcctactccaagcactcctcaactgca
gcccgctctgccaccaacaagcaggccctgacagcccctgccgcctcacctccctccacc
atctacgccagggacaaaagccgcaagcacaggacgggtgtgctggtgtccttctcggac
acctgtgtgcgcgtgagcaggagggcagcagcctctgtggcgtccgtcttctcactgctc
ttacagagtgtgctgctgctgaggtcacgtaaagagggcacaggtgtcctgtggtcagct
ttagacacctgtctgaaccatagcaggagggcagctgccttcactgtgtgtgtagtgact
ctgctcatacaggctgctgtgctgaagacgggcagtgtgggcagaaaagtggttaatgga
gctcactccagctactgcggaagcatgaatgtaaatgagttggggactgaggggaaacgc
atgaatctgaatggtgctctttgtgacgactgcaaagggaagcagcgcgtggagacgcgc
attgtccaatcctcatcacgggtccgccggtcacaccatgtgttgggggaactgtggctt
gccactgcttactcaggttacctattaagcgatcaaactctggcctatcctcatacactt
gaaatgaatgaatccagttcaacctttttagtcccttgttttttgttacttggttggtcc
ccaggctccagtgtgttgtgggcggggcagaaggcaggctcagctgtgcggtccgtgatg
aggaggatgctgtctgttctctggttggcagccgtgtccccagggaagtcagtgaccggg
gctttctggtggctggggactggatggtatcatctggccaccgtcatgtcgctcctcaac
atcttcgtcttgacacggtgccttcccaagctcctcaaactcctgctgattctgctccca
ttcctccttgtcctcctggctctgtggcattggggtccgtccagcctgctgtctgtgttg
cctgccattaacatcactgagtggaggacggcctactccttcagtcagacccctctggaa
ccaaccaaagacagccagcccatcatggctcaaccaccaccagctgtctcacagccaggc
agtgtgctggtgtctgtggactctgagcgcctagcccggttggagcagaggctggcccaa
ctgtgggagaaggtggagcgagggggccgaaggcaggaaaaccagcacagggaggtgctg
agtctctaccagtctgtacgagagcagctggacacccagacggacaaggacagcatgggg
ctgtgggtgtctggcctgctggaggagagactccttctgctgaagagagggatggagaag
gatgcagcactgcggagagaactgagtcaggagattggagagcagtatgtggtgcagcag
cagggccaagagtctcgtctggctcagctagaggtgctgctgcagacactgactgccaag
acagaggaggtgcagaggaggcaagcagacacttccagtgctacacctgcactgccacca
gttcctgtgcaagtcaatgtgggtgtggacagcgagtcccgtgatgccttgctggcggag
gtgcaacttctagaggcaacgctggggggcattaggcaggacctgcagggggtgatggga
tgccagggcatgtgtgaccgcctggacacactccatgaaacggtgtctgagcaagtgtct
gcccaggtgaggacggaactgcgggccctgttctctcgcagcgagcaggtcggagattcc
caaaccggagaaaaggagctcccagagtccctgctgcagtggctctctgagcgctatgta
agcggggctgatgtgcacgcctctctgacctccctagagctcagcatcctgcagaacgtg
accctgcagctggagaagagcagggccaggcaggagacgcacagcactgagactgtcact
cagactgtgatgcacactgttggagccgcaggggccgggatgtctgaggagcatgtacag
ctcatagtgaagaatgctctgaaactctactcccaggatcggactggcctggtagactat
gctctggagtctggcggcggcagcatcctaagcactcgctgctctgagacgtacgagaca
aagactgcactgatgagtctgtttggcctcccactctggtacttctcccagtctcctcgt
gtggccatacagcctgacgtccatccagggaactgctgggcgtttcagggttctcatggt
tacctggtgattcgtctctccatgaggatcgtgccctctgccttctcattggagcacatc
cccaaatccctttcgccaacaggcaccatcagcagcgccccgcgccagtttaccgtctat
ggtctggatgatgagtaccaggaggagggtaagttactgggcagctacacctaccaggat
gatgaagatgcgcttcagacttatcctgtcaccgaggagaatgataaagcctatcagatc
attgaggttcgagtgctgtccaactggggtcacccggagtacacctgcctgtaccgcatc
agagtgcacggtcagcccagtgtcaactga
DBGET
integrated database retrieval system
