Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139376579
Help
Entry
139376579 CDS
T10872
Name
(RefSeq) neutral ceramidase isoform X1
KO
K12349
neutral ceramidase [EC:
3.5.1.23
]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla00600
Sphingolipid metabolism
ocla01100
Metabolic pathways
Module
ocla_M00099
Sphingosine biosynthesis
Brite
Enzymes [BR:
ocla01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.23 ceramidase
139376579
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
139376579
NCBI-ProteinID:
XP_070975430
LinkDB
All DBs
Position
20:57530877..57546899
Genome browser
AA seq
773 aa
AA seq
DB search
MARGKTVCCGLSTLEVTLMVLFVVMTAVSVGLISVMAVHWEDRLQEPEPTVNPTAGLHEN
PYLIGVGRADCTGPPGDVPLMGYANLEQTAAGIHTRLFSRAFIVDNGSKRVVFVTADIGM
VSQRLRLEVLKELEVKYGILYRQDNVILSGTHTHSGLGGYFQYTLFMITSKGYIKPSIKA
IVNGIVKSIDIAHRNIKPGRIYMSKGELEESNLNRSPHSYLNNPAEERNKYKSNTDKQVT
LLKFTDLDGDGMGMLSWFAVHAVSMNYTNQMVSSDNMGYASYLLEQDKNIGFLPGEGPFV
AAFASSNLGDASPNIRGPFCANTGLPCDYLNSSCPIGGLKMCVALGPAGSDMFNNTKIIG
ENIFKRAKDLYGKARQEVRGPLHAAHQWVNMTDVTVQLNSTHTGRTCKPALGHSFAAGTT
DGGGDLNFTQGAVEGDPFWDGIRDALLGAPSNETQDCHQPKPILFSTGEMTWPLPWHPSI
VDVQIITIGPVAIVAIPGEMTTMSGRRIREAVKQELEAQGTFSNAEVVVAGLCNIYTHYI
TTYEEYQIQRYEGASTIYGPHTLSAYIQKFRGLAKAIAEVRTTYCTVHVPAPVTVNVLFQ
PTVFQLLLCSQGKEQELPKGPEPPFFKDSQLFSLLPAAAVDKKPINTTFGEVLERVDPEY
TVGDVASVTFVAGNPRHSGDIRDKTFVTVEKYHNSTAHWDVVHTDASWETRFHWVKNGAE
SNATIEWHIPLSAQAGSYRIRHFGHYKQRKGFLETVIIAYEGVSDVFRVSKIK
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
atggctcgggggaaaacagtgtgctgtggcctgagcaccctcgaagtcaccctcatggtc
ctgtttgtggtcatgaccgcagtgtctgtggggctcatctcagtcatggccgtccactgg
gaagaccgattgcaggaaccagagcctacagtaaatcctactgcaggactacatgagaac
ccatacctcataggggtgggcagagcagactgcacaggaccccctggggatgtccccctg
atgggctatgcgaacttggagcagactgctgcgggtatccacacccgcctcttcagcagg
gcctttattgtggataatgggagcaagagggtggtgtttgtgacagctgacatcggcatg
gtctctcagaggctacggctggaggtgctgaaggaacttgaggtgaaatatggtatcctg
tacagacaggacaacgtgattctgagcggcacccacacacactctggtctgggtgggtac
ttccaatacaccctcttcatgatcactagtaaaggttacatcaaaccctccatcaaagcc
atcgtcaatggaattgtcaagagcattgatatagcacacaggaatataaaacctgggaga
atctacatgagcaaaggagagcttgaggagagcaacctaaacagaagtcctcactcctac
ctcaacaaccctgcagaggagaggaacaagtataaatccaacacagacaagcaggtcaca
cttctgaagttcacagacctggatggagatggtatgggcatgctcagctggttcgctgtc
catgccgtcagtatgaactacaccaatcagatggtcagcagtgataacatgggctatgcc
tcttacctactggagcaggataaaaacattggcttcttgcctggagaggggccgtttgtg
gcagcctttgcctcttctaacctgggagacgccagcccaaacatcagagggccattctgt
gccaacactggactcccctgtgattacctcaacagctcctgtcccatcggagggctaaaa
atgtgtgttgcgctgggtccggcaggatctgacatgttcaacaacaccaagatcatagga
gagaacattttcaaaagggcaaaggatctgtatggtaaggccagacaggaggttcgtggg
cccctccatgcagcccatcagtgggtgaatatgactgacgtgaccgtccagctaaactct
acacacacaggcagaacctgtaaaccagccctgggccacagcttcgccgcagggactaca
gacggaggaggcgacctcaatttcacacaaggggctgttgagggtgacccattttgggac
ggaattagagatgcactgcttggagctccctccaatgagacacaggactgccaccaaccc
aaacctattctctttagcactggagagatgacctggcccctcccctggcacccaagcatt
gtggacgttcagatcatcaccataggacctgtggccattgtggctatccctggagaaatg
accacgatgtcaggaaggaggataagagaggcagtcaagcaggaattggaggcccaggga
acattcagtaacgctgaggtggtcgtcgctggcctgtgcaacatctacactcattacatc
accacctatgaggagtaccagatccagcgttatgaaggagcttccaccatctacgggcct
catacactttctgcatacattcagaagtttaggggcctggccaaggccattgcagaggtg
aggaccacatactgtacagtacacgtaccggctcctgttacagtgaatgtcctattccag
cctactgtatttcaacttctcctatgctcacagggtaaagagcaggagctgcccaagggt
cccgagccccctttcttcaaggacagtcagctgttcagcttgcttcctgctgcggctgta
gacaaaaagccaatcaacaccacgtttggagaggttttagagcgagtggacccagagtac
acggttggggatgttgcttctgtcacatttgttgcagggaatccaagacactcaggagac
attagggataagacttttgttaccgtggaaaagtatcataacagcacagcacactgggac
gtcgttcacacagatgcctcttgggagacaaggtttcactgggtgaagaatggagcggag
agcaatgctaccattgagtggcacatccctctgtcagcccaggctggctcctacaggatc
cgacactttggacactacaaacagcggaagggattcctagagactgtgatcatagcgtat
gagggtgtgtcggatgtcttcagagtctccaaaataaagtag
DBGET
integrated database retrieval system
