Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139376588
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Entry
139376588 CDS
T10872
Name
(RefSeq) F-box only protein 11-like isoform X1
KO
K10297
F-box protein 11
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ocla04121
]
139376588
Ubiquitin system [BR:
ocla04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
139376588
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta_helix
NosD
F-box-like
F-box
zf-UBR
Motif
Other DBs
NCBI-GeneID:
139376588
NCBI-ProteinID:
XP_070975454
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All DBs
Position
20:58310322..58326605
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AA seq
889 aa
AA seq
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MNSVRATNRRPRRVSRPRPVQPDQNEGDRADEEAPAAAAEVAVEESGPAAGNSPYQLRRK
SLLPKRTASSTAVACPSKTAMEGASTSTTEPFGHRAKRARVSGKSHDLPAAPAEQYLQQK
LPDEVVLKIFSYLLEQDLCQTACVCKRFSQLANDPILWKRLYMEVFEYTRPMMHPEPGKF
YQVSPEEHDHPNPWKDSFQQLYKGAHVKPGFAEHFYSNPGRYKGRENMLYYDTIEDALGG
VQEAHFEGLIFVHSGIYTDEWIYIESPITMIGAAPGKVSDKVVIENTRDSTFVFMEGSED
AYVGYMTIRFNPDDKSAQHHNAHHCLEITVNCSPNIDHCIIRSTCTVGSAVCVSGQGACP
SIKHCNISDCENVGLYITDHAQGIYEDNEISNNALAGIWVKNHGNPIIRRNHIHHGRDVG
VFTFDHGMGYFESCNIHRNRIAGFEVKAYANPTVVRCEIHHGQTGGIYVHEKGRGQFIEN
KIYANNFAGVWITSNSDPTIRGNAIFNGNQGGVYIFGDGRGLIEGNDIHGNALAGIQIRT
NSCPIVRHNKIHDGQHGGIYVHEKGQGVIEENEVYSNTLAGVWVTTGSTPVLRRNRIHSG
KQVGVYFYDNGHGVLEDNDIYNHMYSGVQIRTGSNPKIRRNKIWGGQNGGILVYNSGLGF
IEDNEIFDNAMAGVWIKTDSNPTLRRNKIHDGRDGGICIFNGGRGLLEENDIFRNAQAGV
LISTNSHPVLRKNRIFDGFAAGIEITNHATATLEGNQIFNNRFGGLFLASGVNVTMKDNK
ILNNQDAIEKAVSRGQCLYKISSYTSYPMHDFYRCHTCNTTDRNAICVNCIKKCHQGHDV
EFIRHDRFFCDCGAGTLSNPCTLAGEPTHDTDTLYDSAPPIESNTLQHN
NT seq
2670 nt
NT seq
+upstream
nt +downstream
nt
atgaactccgtcagagccaccaaccggagacccaggcgagtctcaaggccgcgcccggtg
cagcccgaccagaacgagggcgaccgagcagatgaggaggctccagctgcagcagcggag
gtggctgtggaggagtccgggcctgcagctgggaacagcccctaccagctccgacgcaag
tctctattgcccaagagaacagcctccagtactgcagtggcctgtcccagcaagactgca
atggagggagcctccacctcaacaaccgaacccttcggccaccgagccaaacgggccaga
gtctccggcaaaagccacgacctgccagcggctccagcagagcagtacctgcagcagaag
cttccagatgaggtggttctgaagatcttctcatacctcctggagcaggacctctgtcag
actgcctgcgtctgcaagcgcttcagccagctagccaacgaccctatactctggaagcgt
ttgtacatggaggtgtttgagtacacacgtcccatgatgcaccctgagccaggaaagttc
taccaggtcagccctgaggaacacgaccaccccaatccctggaaggacagcttccaacaa
ctgtataaaggagcccatgtgaagccaggctttgctgaacatttttacagcaaccctggg
aggtacaaaggcagggagaatatgctgtactatgacacaatagaggatgcattaggaggg
gtgcaggaggctcattttgaagggctgatcttcgtgcactctgggatctacactgatgag
tggatctacatcgagtcccccatcaccatgatcggagcagctccgggtaaggtgtctgat
aaggtggtgattgagaacaccagagactcaacgtttgtcttcatggaaggatcagaggac
gcctacgtgggatacatgactatcaggtttaacccagatgataagtcggctcagcaccac
aatgcccaccactgtctggagatcactgtcaactgttctcccaacatagaccactgtatc
atcagatctacctgcacagttggctcggctgtctgtgtgagcggccagggggcgtgtcct
agcatcaaacactgcaacatcagcgactgtgagaacgttggactttacatcaccgaccat
gcgcagggtatctatgaggataatgagatcagtaataatgcattggcgggaatctgggta
aaaaaccacggcaaccccatcatcagacgaaaccacatccaccacggccgagatgtagga
gtcttcaccttcgaccatggaatgggttattttgagagttgtaacatccaccggaatcgc
atagcaggctttgaagtgaaggcgtatgctaaccctacagtggttcgctgtgagatccac
catggccaaacagggggaatctatgtgcatgagaaaggacggggacagttcatagaaaac
aagatctacgccaacaacttcgctggagtctggatcacctccaacagtgaccctacgata
cggggcaatgcaatcttcaacggtaaccaagggggcgtgtacatatttggcgatgggcgt
ggcctgatcgaggggaatgatatccatggcaacgctctggctggaatccagatcagaacc
aatagctgcccaattgtacgccacaacaagatccatgacggacagcatggtggcatctat
gtgcatgagaagggccagggtgtgatcgaggagaacgaggtgtacagcaacacgctggca
ggtgtctgggtgaccaccggcagcacacctgtcctccgcaggaaccgcatccacagcggc
aaacaggtaggggtgtatttctatgacaacggtcatggggtgttggaagacaacgacatc
tacaatcacatgtactctggcgttcagatacgaactggcagcaaccccaagatccgacgc
aacaagatctggggagggcagaacggaggcattctggtctacaactcgggtctgggtttc
atcgaggacaatgagatcttcgacaacgccatggcgggcgtgtggattaagacggacagc
aaccccacgctgcgacgcaacaagatccacgacgggagagacggaggcatctgtatcttt
aacggagggagaggtcttctggaggagaacgatattttcaggaatgcccaggcaggagtt
ctgatcagcaccaacagccaccctgtgctccgcaagaaccgtatctttgacggctttgct
gcaggtatcgagataaccaaccatgccacggcgactctggagggaaaccagatcttcaac
aaccgtttcggtggcctgttcctcgcctcgggggtcaacgtcaccatgaaagataataag
atattgaataatcaggatgccatagagaaagctgtgagcagaggacagtgtctctacaag
atctccagctacacctcctaccccatgcacgacttctacaggtgtcacacctgcaatacg
acagacaggaacgccatctgtgtgaactgcatcaagaagtgtcaccaaggacacgacgtg
gagtttatacggcacgataggtttttctgtgactgcggagcgggaactctttccaacccc
tgtacgctggctggagaaccaacgcatgacacagacacactctatgactccgctccgccc
atagagtccaacacgctgcagcacaactga
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