Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139376612
Help
Entry
139376612 CDS
T10872
Name
(RefSeq) LIM domain-binding protein 3-like isoform X1
KO
K19867
PDZ and LIM domain protein 5/6/7
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
139376612
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ocla04990
]
139376612
Domain-containing proteins not elsewhere classified [BR:
ocla04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
139376612
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4749
PDZ
PDZ_6
Motif
Other DBs
NCBI-GeneID:
139376612
NCBI-ProteinID:
XP_070975488
LinkDB
All DBs
Position
20:58771640..58788085
Genome browser
AA seq
295 aa
AA seq
DB search
MATYTVSLNGSAPWGFRLHGGKDFNMPLTISRITPGSKAAGGSLVQGDIITSIDGLSTEG
MTHLEAQNKIKMASNKLALTMQKSKRPTPVPMATPRMDSPMSVIPHQKIIANTAGNQEYV
PSFNPIALKDSALSTHKPIEVRGPGGKATIVHAQYNTPISMYSQDAIMDAIAGQSQSKGH
EGEDVPAGSPLAGSLPMKDPVVDSASPVYQAVIQTHDRDEEIAEWARRAANLQSKSFKML
AHLTGTEYMQDPDEEALQRSRDKFESEVKGPRFRKLKNWHNGLSAQILNVPETPF
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atggctacatacacagtatctctcaatggctctgcgccatggggtttcagactacacgga
ggaaaagacttcaatatgccacttaccatctccaggataactccaggcagtaaggctgca
gggggcagtctcgtccagggtgacatcatcacatcgatagacggccttagtacagaaggc
atgacacacctggaggcacagaacaagattaagatggcctccaataaactggccctcacc
atgcaaaagtcaaaacgtcctacccctgttcccatggcaacgcccagaatggactccccc
atgtcagttattcctcaccagaagattattgcaaacacggctggaaatcaggagtatgtg
cccagctttaaccccatagctctgaaggactcggctctgtctacccataagcccatcgag
gtgcgcggcccgggaggcaaggccaccatcgttcacgctcagtacaacacccccatctcc
atgtactcacaggacgccatcatggacgctattgccggacagtcacagtccaagggccat
gagggtgaggatgtacctgctggctcccccctggctggttccctgcctatgaaggacccg
gtggttgacagtgcgtctccagtctaccaggctgtgatccagacacatgatagagacgag
gagattgccgagtgggccagacgggctgccaacttgcagtccaagagcttcaagatgctg
gcccacctcaccggcaccgaatacatgcaagacccagatgaggaggccctgcagaggtcg
agggataagtttgaatcggaggtgaaaggacctcgcttccgcaagctgaagaactggcac
aacgggctctcagctcagatcctcaatgtccctgagactcccttctga
DBGET
integrated database retrieval system
