Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139376635
Help
Entry
139376635 CDS
T10872
Name
(RefSeq) voltage-dependent T-type calcium channel subunit alpha-1G
KO
K04854
voltage-dependent calcium channel T type alpha-1G
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04010
MAPK signaling pathway
ocla04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
139376635
04020 Calcium signaling pathway
139376635
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ocla04040
]
139376635
Ion channels [BR:
ocla04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
139376635
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
Motif
Other DBs
NCBI-GeneID:
139376635
NCBI-ProteinID:
XP_070975542
LinkDB
All DBs
Position
20:60695968..61015284
Genome browser
AA seq
2583 aa
AA seq
DB search
MDEDGGNLPGDLRARDTEGRSSLPRTFIRLNDLSGAGGGGVERGEVEPVSPGPDGLSTSG
EEASAGGDDELPHPTLAPVVFFYLKQTTPPRSWCLKMVCNPWFERASMLVILLNCVTLGM
FQPCEDHDCESERCKILEDFDDFIFAFFAVEMVIKMVALGIFGKKCYLGDTWNRLDFFIV
LAGMLEYSLNLQNVSFSAVRTVRVLRPLRAINRVPSMRILVTLLLDTLPMLGNVLLLCFF
VFFIFGIVGVQLWAGLLRNRCFLPENFSLPLSVELGNYYHTENDDENPFICSMPRENGMR
LCSSVPTLYEEGGLQCQMDMKSYNSTDNTTCINWNQYYSNCSAGHVNPFKGAINFDNICY
AWIAIFQVITLEGWVDIMYFVMDSHSFYNFIYFILLIIIGSFFMINLCLVVIATQFSETK
QRESQLMKEQRIRFLSNASTLASFSEPGSCYDELLKLLVHVIRKGCRQVAHVCRALMRRA
GMNIAASPPALERERGSQRRRRKASRQGSVVSRKGSMSVHHLAHQHHHHHHHYHLVNGSV
RGGLGGRGVEGVGGGGADVETGSHSNNGGAGRLMLGPPPSTSDLNLATPTSPANPALGIM
CHTDCQLEPTTPTTLTPTPTTTPSPFSLAPIPMSRAMKRNSVPFAAPGPKNYPTLQPRAL
MESRSVSVTASTISNINLNLNIPPLTLERGPQSLVNTHTPTPAQLSNRDLSVIGTLDPSF
PFDPESCPYCAKALAGESEGTDGNENPGDSDSEGIYEFTQDLHHRDRRDRRDSRQPRKGQ
RKLGTTAGRVVRAWRLVCDTFRKIVDSKYFGRGIMIAILINTLSMGIEYHEQPDELTNAL
EISNIVFTSLFALEMLLKVLVYGPFGYIKNPYNIFDGIIVVISVWEIVGQQGGGLSVLRT
FRLMRVLKLVRFMPALQRQLVVLMKTMDNVATFCMLLMLFIFIFSILGMHLFGCKFGSER
DGDTLPDRKNFDSLLWAIVTVFQILTQEDWNKVLYNGMASTTPVAALYFIALMTFGNYVL
FNLLVAILVEGFQTEEVPATEDLHVQLSVIQLPIGSGGEESKSVSEADLSSRSMEDVNSS
RKDVSGSPVVPINGHVDLKTSLTPPLITHTAATPMPVPKLPAVGDPALGYESRRGSNVSM
DLASYDKSPTSARSTSPYAPWCSASGWTSRRSSWNSLGRAPSLKRTKLQSGERRSLLSGE
GGSSSEDEEGGGGGTSEGDDASLCRINSMSQPRHRRIESVETRGSIDLAPDTLLQVPYLY
RSASMHSSRPPSLGGLRAPEHSDCNGKGTSAPGGALAPTQLSLEDNTEDDAAEEEVVVGH
LARLLGWLDRKQPEWCRQRDTWSLYILPPDSRFRMACNKIITHKMFDHIVLVIIFLNCIT
IAMERPRIDPYSVERIFLTLSNYIFTAIFVAEMTVKVAALGWLFGDKAYLRSSWNILDGI
LVMISAIDILVSLVSNSSPKILGMLRVLRLLRTLRPLRVISRAPGLKLVVETLMSSLKPI
GNIVVICCAFFIIFGILGVQLFKGKFFACQGDDVRNITNKSDCIMANYKWVRQQYNFDNL
AQALMSLFVLASKDGWVDIMYDGLDAVGVNQQPQLNYNPWMLLYFISFLLIVSFFVLNMF
VGVVVENFHKCRRSQEAEEAKRREEKRLKRMEKKRRNVLMIPGVSWVLSEGTLTEAQSKP
YYSDYSPTRLLIHKMCTSQYLDLFITIVIALNVITMAMEHYQQPKELDEALKICNYIFTI
VFVLESVFKLVAFGFRRFFKDRWNQLDLAIVLLSIMGITLEEIEVNASLPINPTIIRIMR
VLRIARVLKLLKMAVGMRALLDTVMQALPQVGNLGLLFMLLFFIFAALGVELFGDLICDE
LHPCEGLGRYATFKNFGMAFLLLFRVSTGDNWNGIMKDTLRDCQQENAGTCYNTVVSPIY
FVSFVLTAQFVLVNVVIAVLMKHLEESNKEAKEEAELEAELELELQHGGRGGCGSGRSPQ
LSPLALGMEEGSGGSPWRSPEREIQRGNVMDSPPADITRRDSIHISTDAPLGLEPPLEVS
VRRAMFDSVSSVIQGSMEGELSLMDNLSESICHYYALPPLPSKHCSDKKIPLAEMEALSL
TSDKSWSLALTDDSTPDDINPLLLTSLESNVLTPLEDNLLSVRKSAVGRTHSLPNDSYMF
LPLEPFGPPGAGLAPGLSPVLTQATGPQHIEALSSALSGSNTSVRSQPEESSQQSAVPTD
FFRPISPHSLSDSENIPRLPPPQHTHTLSRTLRRQVAVSNDSQEALWSDGGEGVLNVASL
ALPLSSSSSSSSHLHQQPSLWLVPATPGASPQLSRPSSVHTQHPFSNHNQHHLSSSPNSP
SSLSSPPPPLPSARPWRQEEASADHEVSLINRAGLAGSEDVTGVGLESEVGGLNGSYQGH
EVGRGEGSRPCLRQLKRFHSADAQGRSILASRPRPLSWLDDPRRHSVEVCSSVESSPQRS
TTSSGFVSRADSLQIHSQTTTKTLPSPRRKKKMSPPCISVDPPDGLESQPGLHPTLGGLG
GLGMPPPLPSRDTSCLRRRAPSSDSKDSFDLGAGEGLGQEGGGPNPKLLTLPSFSFEKTS
SEH
NT seq
7752 nt
NT seq
+upstream
nt +downstream
nt
atggatgaggatgggggaaatctccccggtgacctccgcgccagggacacagaggggcgc
tcctctctccccagaactttcatacggctcaacgacctgtctggggccggaggaggaggc
gtggaacgcggcgaggtggagccagtatcaccgggacctgatggactctctacatccggg
gaggaggcctcggcaggcggggatgacgagctgcctcaccccaccctggctcccgtcgtg
tttttctacctgaaacaaaccacccctccgaggagctggtgtctgaagatggtctgcaac
ccgtggtttgaacgagcctccatgctggtgatcttgttgaactgcgtcaccctggggatg
ttccaaccctgtgaggaccacgactgtgagtcggaacgatgcaagatcctggaggacttt
gatgactttatctttgcgttctttgcggtggagatggtcatcaagatggtagcgctgggc
atctttgggaagaagtgttatctaggagacacctggaacaggctcgacttctttatcgta
ctggccggaatgctagagtactctctgaacctgcagaacgtgagtttctcagcggtgaga
acggttcgagttctgagacccctccgagccatcaacagagtacctagtatgcgtatcctg
gtgaccctgctactggacaccctgcccatgctggggaatgtcctgctgctctgtttcttt
gtcttcttcatcttcggcattgtgggcgtgcagctgtgggcggggctactgaggaaccgc
tgcttcctgcctgagaacttctcacttcctctgtccgtcgagctcggcaactattaccac
acggagaacgatgacgagaaccccttcatctgctccatgcccagggagaacggcatgcgt
ctgtgttcctctgtgcccaccctgtatgaggagggaggtctccagtgtcagatggacatg
aagtcctacaacagcacagacaacaccacctgtatcaactggaaccagtactacagtaac
tgctcggcgggacacgtcaaccccttcaaaggagccatcaactttgataacatctgctac
gcctggatcgccatctttcaggtgatcacgctggagggctgggtggacatcatgtacttt
gtgatggattctcactccttctacaacttcatctacttcatcctcctcatcatcattggc
tcgttcttcatgatcaacctgtgtctggttgtcatcgccacccagttcagtgagaccaag
cagagggagagccagctgatgaaggaacagcgcatccgtttcctgtccaacgctagtacc
ctggcctccttctccgagccgggctcctgctacgacgagctgctcaaactcctggtccat
gtcatccgcaaggggtgcaggcaggtggcccatgtctgtcgggccttgatgcgccgtgct
gggatgaacatcgcagcctctccccctgccctggagcgagagagggggagccagagaagg
aggaggaaggcttccagacagggttctgtggtctccagaaaagggtcgatgtccgttcat
cacttggctcaccaacaccaccaccatcatcatcactatcacctagtgaatgggagtgtg
agggggggactagggggtaggggggtggagggggtcgggggaggaggggcggacgtggag
acgggttcacatagcaacaacggtggcgctggacggctcatgttgggtcctcctccatcg
acctctgacctgaacttggcgaccccgacgtcaccagccaatcccgcgctgggcatcatg
tgccacacagactgccaactggagcccaccacccccactaccctcacccctacccccacc
actacccctagccccttctccctggcacccatccccatgtccagggctatgaagaggaac
tcagtgccctttgctgcccccggacctaagaactaccccaccctacagcccagggcacta
atggagtctagaagtgtcagtgttacagctagtaccatcagtaatataaacctcaacctc
aatataccaccactaaccttggagaggggaccacagagtctggtgaacacacacacaccc
acgccagcccagctatccaaccgtgacctgagtgtcatcggaaccctggacccctcgttc
ccctttgacccagagtcatgcccatactgtgccaaggccctagcaggggagtcagagggc
acggacggaaacgagaaccctggggactcagacagcgagggcatctacgagttcacccag
gacctccaccacagagaccgcagggaccgccgggacagccgtcagcccaggaaggggcag
cgaaagctgggtaccacggcagggcgagtggtccgagcctggaggctggtgtgtgacacc
tttaggaagatagtcgacagcaagtactttggaagagggatcatgatcgccattctgatt
aatacactgagtatggggattgaataccacgaacagcctgatgagctgaccaatgcgttg
gagatcagtaacatagtgttcaccagtctgtttgccttggagatgttactcaaggtgttg
gtctatgggccattcggatacatcaaaaacccctacaacatttttgacgggatcatagtg
gtcatcagtgtatgggagatcgtgggccagcagggcggtggtctgtctgtgctgcgtacc
ttcagactgatgcgcgtgttgaagctggtgcgcttcatgcccgctctgcagaggcagctg
gtggtgctgatgaagacgatggacaacgtggccaccttctgtatgctactcatgctcttc
attttcatcttcagtatcctgggcatgcatctgtttggctgtaagtttggatcagagaga
gatggagacactctaccagacaggaagaactttgactctctgctctgggccatcgtcact
gtgtttcagatcctaactcaagaggactggaacaaggtgctgtataatggtatggcttcc
accactcctgtggctgctctctacttcatcgccctcatgacctttgggaactacgtcctc
ttcaacctgctggtggccatcttggtcgaaggcttccagactgaggaagtgcctgcgaca
gaggacttgcatgtccagttgagcgttattcaactgcctatagggtcagggggagaagaa
tccaagtcagtgtcggaggcagatttatcctcgaggagtatggaggacgtgaacagcagt
agaaaggatgtgtctggctccccggtagtcccaataaacggtcatgttgacctgaagacc
agtctgacccctcctctgattacccatactgctgccacccccatgcccgttcccaagctg
cccgccgtgggtgaccctgccctgggctacgaatcccgacgcggcagcaatgtctccatg
gacctagcctcttacgacaagtctccgaccagtgcccgtagcacctccccttacgccccg
tggtgctctgccagtggctggaccagccgtcgatcgagctggaacagcttaggccgtgcc
ccctcgctcaaacgaacaaagcttcagtctggcgaacggcggtcgctcctctccggcgag
ggagggtccagttcggaggatgaggaggggggaggagggggaacatcggagggggacgat
gcatccctgtgtcgtattaactccatgtcccagcccagacacaggaggatagagtcggtg
gagaccagggggtccatagacctggcccccgacacactgctacaggtgccctacctgtat
cgctcagccagtatgcacagctcgagacccccctcgctaggaggcctgagagccccagaa
cacagtgactgtaatgggaagggtacttcggcccctggcggggccctggcccctacacag
ctctccctggaggacaatacagaggacgacgcagcagaggaggaggtggtcgtgggtcat
ttggccaggctgttaggctggctggacaggaaacagccagagtggtgtcgacagagagat
acctggtccctgtacatattacccccagactccaggtttcggatggcgtgcaataagatc
ataacccacaagatgtttgaccacattgttctggtcatcatcttcctcaactgcatcacc
atcgccatggagaggccgaggatagacccatacagcgtggagcgtatcttcctcacgtta
tccaactacatcttcacagcgatcttcgtggctgagatgacagtcaaggtggctgcactg
ggctggttatttggtgataaggcctacctgaggagcagctggaacattctagatgggatt
ttagtgatgatttcagccatagatatcctggtctcattggtatcgaacagcagccccaag
atactgggcatgctcagagtgctgcgcttgctacggacgctcaggccactacgtgttatc
agcagggcgccaggtctgaagctggtagtggagactctgatgtcatctctgaagcctata
gggaacatcgtggtcatctgctgcgctttcttcataatctttggtatcctgggagtacag
ctcttcaaggggaagttctttgcatgtcagggagatgacgtgagaaacatcaccaacaag
tcggactgtataatggccaactacaaatgggttagacagcagtacaactttgataacctg
gcacaggctctgatgtctctcttcgtgctggcttctaaggatggttgggtggatatcatg
tatgatggattagatgcagtgggagtcaaccaacagccacagctgaactacaacccgtgg
atgctcctctacttcatctccttcctgctcatcgtcagcttcttcgtgctcaacatgttc
gtgggcgtggtggtggagaacttccacaagtgtcggcgcagccaggaggccgaggaggct
aagcgcagggaggagaagagactgaaacggatggagaaaaagagacggaatgtgttgatg
attccgggggtgagttgggtcctctctgaaggcacactgacagaagctcagagtaagcct
tactactcggattactcccccactcgcctcctcatccacaagatgtgcacctcccagtat
ctggacctcttcattaccattgtcattgcactcaatgtcatcaccatggcgatggaacac
taccagcagccaaaggagttggacgaggcgctgaagatctgtaactacatcttcaccatt
gtcttcgtcctggagtctgtcttcaagctggtggcctttggattccgacgtttcttcaag
gacaggtggaaccagctggacctggccatagtgttgttgtccatcatgggcatcactctg
gaggagattgaggtcaacgcatccctgcccatcaaccctactatcatcagaatcatgaga
gtgctaaggatagcacgagtgctgaagctactgaagatggcagtggggatgagagcgttg
ctggacactgtcatgcaggctctgcctcaggtggggaatctgggtcttctcttcatgctg
ctcttctttatcttcgcagcactgggagtggaactgtttggtgatctcatttgtgatgag
ctgcacccgtgtgagggcttggggcgctacgctacgtttaagaactttggcatggccttc
ctgttgctgttcagagtatccaccggagacaactggaacggcataatgaaggacaccctg
cgagactgtcaacaggagaatgcaggcacctgttacaacacggtggtctctcctatctac
tttgtctcctttgtgctgactgcccagtttgtcttggtcaacgtggtcatagccgtcctc
atgaagcacctggaggagagcaacaaagaggccaaggaggaggcagagctggaggctgaa
ctagagctggagctacagcatggaggaaggggagggtgtggcagtgggagatcaccccag
ctaagccctctggccctgggcatggaggagggatctggcggctccccctggaggtctcca
gagagggagatccagaggggcaatgtgatggattctcccccagcagatatcactagaaga
gactccatacacatcagcactgatgctccgctaggcctggagccaccactagaggtgagt
gtgcgaagagcaatgtttgactcggtctcctcggtgatccagggttcgatggagggagag
ttgagtctgatggacaacctgtcagagtcaatatgtcactactacgccctacccccacta
cccagcaagcactgcagtgacaagaagatccctctagcggagatggaagctctctctctg
acctccgacaaatcctggtccctagctctcaccgacgactccacccctgatgatattaac
cctctcttactaaccagtctggagtccaacgtactgacaccgttggaggacaacctgttg
agtgtacggaagtcagcggtgggccgcacccactccctacccaatgacagctacatgttc
ctgcctctggagcccttcggacccccaggagccggcctggctcctggcttatctccagta
ctgacacaggctacagggccgcagcacatagaggcacttagcagcgccctgtcaggctcc
aatacctcggtgcggtcccaaccagaggagagctcccagcagtcggctgtgcctacagac
ttcttcagacccatcagtcctcacagcctctcagactcagagaatataccccgactaccc
ccgccacagcacacacacacacttagccgcacactccgcagacaggtggcagtatctaat
gattcccaggaggctctgtggtctgacggaggggagggggtcctaaatgtagcttcccta
gccctccccctttcctcctcctcttcctcatcctcccatcttcaccagcagccttctctc
tggctggtccctgccaccccaggggcgtcccctcaactgtcgcgccccagtagtgttcac
acccaacaccccttctcaaaccacaaccagcaccacctctcctcctcacccaactccccc
tcctccctctcctcaccccctcctcccctcccctccgctcgcccctggagacaggaagag
gcctcggcagaccacgaggtgtcgctcatcaaccgggcggggctggcggggagtgaggat
gtcacaggtgtcggactggagtcagaggtcggaggtctcaatggcagttaccaaggtcat
gaggttggccgtggtgaggggagccggccgtgcctgagacagctgaagaggttccacagc
gctgacgcccagggccggagcattctagcgtcccggccacgccccctgtcctggttggac
gatcctcggcgccactcagtggaggtgtgttcgtctgtagagtccagtccccagcgcagc
actacgtcctcggggttcgtctcccgagcagacagcctccagatccattcccagaccaca
acaaagaccctgccctctccccgacgcaagaagaaaatgagccccccgtgtatctctgta
gacccccctgatggactggagtcccagcccggcctccaccctaccctgggaggtttgggg
ggcctagggatgccccctcccttacccagccgggatacctcctgtctgaggagacgggct
ccctccagtgactccaaggactcctttgacctcggggcaggggaggggctgggccaggag
ggaggggggcccaaccccaagctgttgactctgcccagcttctcctttgagaagacaagc
tctgagcactga
DBGET
integrated database retrieval system
