Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139376645
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Entry
139376645 CDS
T10872
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM65
KO
K12031
tripartite motif-containing protein 65
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
Ubiquitin system [BR:
ocla04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
139376645
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
139376645
NCBI-ProteinID:
XP_070975563
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Position
20:61370214..61396887
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AA seq
515 aa
AA seq
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METHNLSCAICLDRFKVPVTIPCGHTFCRDCITAHWDTKSKSDIGPHCPICNEKFPTRPI
LKRNVSLSVLAEATANSAGAFGRDTVPVMRGDMARVTPLILCDRHKKPLVYYCRKDNMCV
CCECAISECKNHEKVLVEAEKENRELLLRRKSVEVGICMEKTERSIAELTENITKAKVTL
QQTSHWVNAKFSMLLKVLAEKQESTENLIEQEKEASLSQGEARLEELQERAKQLGERQSQ
IATLRNLPDIQLIQESRLVEVPRMKDIPVDVTPNLQERLSGVTDVLSRISKLVSEDLEKA
VSTAVGQDKQGSPQDKRPVLAVVPSPAAPCHPAGKEGLSEYRCTLTFDPRTANSHLLLCQ
ENLRAEHLTSGPRPVPAHEARFDHTWQVLCFQGFKHGKHYWELELSKPWAYLGVTYEGIP
RKEKGKRCMVGMNDLSWSLQLDERQLSAWHNGRRETVAGHSHHSRIGILLDYEAGTLTYY
GDGHTRLHAFHCAFTQELFPACWIGEGVTITLCSP
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atggagacccataatttgtcctgtgccatttgcttggaccgcttcaaagtcccagtcacc
atcccatgcggtcacaccttctgtcgagattgcatcacggctcactgggacaccaagtcc
aaatccgacatcgggccgcattgccctatctgcaatgagaaattccccactagacccatc
ctaaaacgcaatgtgtccctgtccgtcctggctgaggccacagcgaacagtgccggtgca
ttcggtagagacactgtaccggttatgaggggcgacatggccagagtcacgcccctgatt
ttgtgtgaccgacacaagaagcccctggtgtactactgccggaaggacaacatgtgtgtg
tgctgcgagtgtgccatctccgagtgtaagaaccacgagaaagtgctggtggaggctgag
aaggagaaccgagagttactactgaggaggaagagtgtggaggtgggaatatgtatggag
aagactgagaggagcatcgctgagctgacagagaacatcaccaaagccaaggtgaccctg
cagcagacctcccactgggtgaatgccaagttttccatgctgttgaaggtgctagcagag
aaacaggagtctacagagaacttaattgagcaggagaaggaggcttccctctcccagggg
gaagctaggttggaggagctacaggaaagggccaagcaactcggggagcgccagagccag
atcgcaactcttcgcaacctgcccgacatccagctaatacaggagtctcggctggtggag
gtccctcgcatgaaggacattccagtggatgtgacccctaacctgcaggagaggctcagc
ggggtgacagacgtcctctcacggatctccaagctagtgtctgaggacctggagaaggct
gtgtctacagctgtggggcaggacaagcaaggttctccccaggataagcgccctgtcctg
gctgtggtccccagtcctgctgctccatgccaccccgctgggaaggagggcctcagtgaa
taccgctgcaccctgacctttgaccctcgcacagccaacagtcacctgctcctctgccag
gagaacctacgggcagaacacctgacctctgggccgcgccctgtcccggcccacgaagct
cgctttgaccacacctggcaggtgctctgcttccagggcttcaaacacggaaagcactac
tgggagctggagttgtccaagccatgggcctacctgggggtgacttacgagggcatcccc
aggaaggaaaaggggaaaaggtgcatggtgggaatgaacgatctgtcctggagcctccag
ctggatgagcgccagctgagtgcctggcacaacggccgccgggagacggtggctggccac
tcccaccactcccgcatcggaattctgctggactacgaggctggaacactgacgtactat
ggagacgggcatacgcggctgcatgccttccactgtgccttcactcaggagctgttcccc
gcctgttggataggggagggcgtgaccatcaccctctgctcgccatga
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