KEGG   Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139376716
Entry
139376716         CDS       T10872                                 
Name
(RefSeq) DNA repair endonuclease XPF
  KO
K10848  DNA excision repair protein ERCC-4 [EC:3.1.-.-]
Organism
ocla  Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla03420  Nucleotide excision repair
ocla03460  Fanconi anemia pathway
Brite
DNA replication proteins [BR:ocla03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Other termination factors
    139376716
DNA repair and recombination proteins [BR:ocla03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     139376716
SSDB
Other DBs
NCBI-GeneID: 139376716
NCBI-ProteinID: XP_070975691
LinkDB
Position
20:64523467..64530452
AA seq 890 aa
MAGQLLEFETEMFLSLFGSDGLLVTAEGMGIDRILLQFMRVYSEEGSLVLLLNTTTPEQE
FFTEQLRAEGVSHLPRTVTSDVQSTERYEVYTQGGVLFVTSRILVVDFLTDRIPAHLISG
ILVYRAHKIIESCQEAFILRLFRQKNKTGFIKAFTDKATSFSSGFCQVERVMRNLFVKKL
FLWPRFQASVNSVLDRHKPEVVELHVSLTPAMRAIQSSVLDIMNACLKELKRYNPTLEAE
DLSLENTLGNAFEKTIRHYLDPLWHQLGAKTKSLVQDLKILRTLLLYLTQYDCVTFLNLL
ESLRSSQKNFGSNSGWLFLDSSTSMFINARSRVYSIPESKKKLKVGADTEKQQSTSEVKR
VLVLEQNPKWEALTEVLQEIEKENKSSELKPGHILICASDDRTCSQLHEYISRGSDSLLN
RLYARTIGKRDALFDPDAHKQQGQSWARKQQPEKETKGKKAKGNAATKPNSKSKKRPSLT
LTQMVGNRVMGSSGDEGGLMEKEEEEELKLDLSSDAYYGVLKEPLTVIHPLRGCTDPYSL
TRVLHEVEPSFVVLYDAELSFVRQLEIYKASRPGKSLRVYFLIYGGSTEEQRYLTGLAKE
KQAFEHLIREKATMVVPEEREGREDTNLDLSRSQEPAYSTTNTRKAGGQEQPKEPSRVIV
DMREFRSELPSLLHRRGLDIEPVTLEVGDYILTADTCVERKSVSDLIGSLQSGRLYTQCL
SMTRYYRKPILLIEFDSAKPFSLMARSDFRQEISANDVTSKLTLLTLHFPRLRILWCPSP
HATAELFQELKKGRLEPDAAAAQAITAESDTVAESADLFNPGPYDFLLRMPGVNAKNYRA
LVKHADSLAHLAKLSQERLAQILGHAGNGKSLYEFLHNTVDIPAPAQKSK
NT seq 2673 nt   +upstreamnt  +downstreamnt
atggctggtcaactacttgaatttgagacggagatgttcctgagtttgtttggctcggac
gggctgctggtgactgcggagggcatggggatagaccgcatcctgctgcagttcatgcgg
gtgtactccgaggaggggagtctggtgctgctgctgaacactaccacgcccgagcaggag
ttcttcacagagcagctgcgagctgagggagtgagccacctgccccggacagtgaccagt
gatgttcagagtacagagcgctacgaagtttatacacagggaggggtcctgtttgtcacc
agccgtatcctagtggtggacttcctcactgacaggatacctgcacacctcatctcgggt
atactggtgtaccgggctcataagataattgagtcttgccaggaagccttcatcttgaga
ctgttcagacagaagaataagacaggcttcattaaggccttcacagacaaggccacatcc
ttctcctcaggcttctgtcaggtggagagagtcatgaggaacctctttgtcaagaaactt
ttcctctggcccaggttccaggcgtcagtgaactcggttttggacagacacaagccagag
gtggtggagctgcatgtgtctctgaccccggccatgagggccatccagagctctgtcctg
gacatcatgaacgcctgtctgaaggagctgaagcgctacaaccccacgctggaggcagag
gacctctccctggagaatacccttgggaatgccttcgaaaagaccatccgtcactacctg
gaccctctgtggcaccagctgggagccaagaccaagtctttggtccaggacctgaagatc
ttacgtaccctgctgctctacctcacccagtacgactgtgtcaccttcctcaacctcctc
gagtcactccgctctagccagaaaaactttggaagcaactctgggtggttgttcctggac
tccagcacctccatgtttattaacgccaggagtcgggtgtacagcattcctgagtccaag
aagaaactcaaggtgggagctgacacagaaaaacaacaaagcacttcagaggtgaaaagg
gtgctggtgctggagcagaacccaaagtgggaggctctgacagaggtgctgcaggagata
gagaaggagaacaagagctctgaactcaaaccaggccacatcttgatctgtgccagtgat
gacagaacctgttctcaacttcatgagtacatcagtcgtggctcagactccctactcaat
agactctacgctcgcaccattggcaaaagagatgccctgttcgacccagacgcacacaaa
caacagggccagagttgggccagaaaacaacagcctgagaaagagaccaaaggaaaaaaa
gccaaagggaatgcagcaaccaagccaaactcaaagagtaaaaagaggccgtctctgacc
ctgactcaaatggttggcaacagagtgatgggcagcagtggggatgagggaggcctgatg
gaaaaggaggaggaggaggagctaaagttagacttgtcgtctgacgcctattacggtgtt
ctgaaagagccattgactgttatccatcctctgaggggttgcactgacccctacagtctg
acgcgggtactgcacgaggtggagcccagttttgtggtgctttatgacgccgagctcagc
tttgttcgtcagctggagatttacaaagcctccagaccggggaaatcactgagggtgtac
ttcctgatctatggtggctccacagaggagcagaggtacctgactggtctggctaaagag
aaacaagcctttgaacacctcatcagggagaaggccactatggtggttcctgaggagaga
gagggaagagaagacaccaacctggatctgagcaggagtcaggagcctgcttactctact
accaacacacgcaaagcagggggccaggagcagcccaaggagccgtcccgtgtgattgtg
gacatgcgtgagttccgcagtgagctcccttccctcctccaccgacgcggcctggacatc
gagcctgtcaccctggaggtgggcgattacatccttactgccgacacctgcgtggagcgc
aagagcgtcagtgacctgattggctcgcttcagagcggacgcctctacacccagtgcctg
tccatgacgcggtactaccggaagcccatcctgctgatcgagttcgactcggccaagccc
ttttccctgatggcccgctccgacttccgccaggagatctcagctaacgacgtcacctcc
aagctgaccctcctcaccctgcacttcccccgcctcaggatcctttggtgcccctcccca
cacgccaccgcagaacttttccaggagctgaagaaaggtcgactcgagccggatgccgcc
gcggcccaggccatcactgccgagtcggacacggtggcagagtcagctgacctcttcaac
cctgggccatatgacttcctgcttcggatgccaggggttaatgcgaagaactacagggct
ctggttaaacacgcagatagcctggcacacctagccaaactaagccaggaaaggctagca
cagattctggggcatgctggcaatgggaagtcgctctatgagttcctgcataatactgtg
gacatccctgcccctgcacagaaaagtaaatag

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