Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139376750
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Entry
139376750 CDS
T10872
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 42-like
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ocla01002
]
139376750
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ocla04121
]
139376750
Enzymes [BR:
ocla01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
139376750
Peptidases and inhibitors [BR:
ocla01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
139376750
Ubiquitin system [BR:
ocla04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
139376750
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
LYRIC
Motif
Other DBs
NCBI-GeneID:
139376750
NCBI-ProteinID:
XP_070975746
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All DBs
Position
20:65555126..65586133
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AA seq
1226 aa
AA seq
DB search
MTIVDRSSEKSDHESVGCKRSGSLTFPGGDGNGMDGGCSSWGAGGPSSSDTPRVKTGGCM
GPTPGATVYSSSAAITADRPKEQVVLTSGDGIALPQKVLFPAERLSLKWNQVNRIGSGLQ
NLGNTCFLNSALQCLTYTAPLSNYMLSREHSKTCHEPGFCMMCTMQNHITQVFANSGNVI
KPIGVLNELKRIAKHFRFGSQEDAHEFLRYTVDAMQKSCLPGSKLDRQTQATSFIHQVFG
GYLRSRVKCLNCKAVSDTFDPYLDVALEIKTAPSITKALEQFVKPEQLDGENAYKCTKCK
KMVPASKRFTIHRSSNVLTISLKRFANYNGGKIAKDVRYPECLDLRPFMSQSHGEPLVYV
LYAVLVHSGFSCHAGHYYCYVKASNGQWHQMNDSSVSVSDIRSVLNQQAYVLFYIRSPDL
KNGGDYNHMSRPPGQSSPRPILTPRVNIGPRHTNTCFIGPQLPPHMAKNTFHINGNGSLR
DFPSGSKPSSGSSSMGKTSYGLLSSSSSSSHSLSCPTGIPDTAKRQKLSFFIGQGKQIRP
SSSSSSYAQPSSCSSSQTTSDMSAPRAPCINGTPSVNGNGHGASFLVPYGQESSEESDQE
GGSGLENGTTKPHVNGRKGGAVYGPVPRVLALKPNGISNGQATMHHNGSGTNGSSKLSQI
GHQNGHHKVNGIKQPEKVNGHVLSPGLGPSSSNEAESHHSGPSKEVYSAIPSQDNPSQSL
HSADSDSHLSPTPEKRTKTHSDPLPHHPPSTTANPPSSLADVGAKPPTDTMRESSSTSNP
GALPLQPTPHSLRTLVSPAFSQPLSGPGQGTTKGLGAPHSRSGEDVRETENSPAAGLDGR
LDGKPSSREGRDRMYSSDRDKGRDRLYSSDRDRDGDRLYSSDRDKDGERNGYHRDMSRER
NWDRDSDRYRHRRDHRDREHHRDREHHRSYRDRSASRDRHWESERRWERNAYHPRDRDRC
HHHYHRPRENRERDRREHSLPHREEPHGRSRWRGERCEGKDRGDGKRGYYPSQEETPLPT
PLSSNTKTSQPPTSPDLSPARPALEKRPDPLREDSVEERRAKKHKKSKKKKKKSKDKARR
RENGTSDVDSSDRAADGSRSSKHKKKKKRRHDTDMEDEKSRSTQSSEGHRDPNAPRESRR
ASSSDEERASRKRRYQDDDGSDNSYPEKHHRSDDDDNKDRFFSHNILPTATSHNASHHHL
NGHTGNGFSRPNGNSHGCSTNGLYNE
NT seq
3681 nt
NT seq
+upstream
nt +downstream
nt
atgaccatagttgacagatcttcagagaaatctgaccacgagtcagtcgggtgcaagcgc
tccggatcgctgaccttccctggcggcgacgggaacgggatggacggcgggtgctccagc
tggggggcggggggtccctcatcctccgacacccccagggtgaagaccgggggctgcatg
ggcccaacccctggagccactgtctacagcagcagtgctgccatcaccgcagacaggccc
aaggagcaagtggtgctgaccagtggggacggcatcgccttgccccagaaggtgctgttc
ccggccgagcggctcagcctgaagtggaaccaggtcaaccgcatcggatcaggtctccag
aacctgggcaatacctgcttcctcaactcggctctgcagtgtctcacctacactgctccc
ctcagtaactacatgctgtcccgggagcactctaaaacgtgtcacgagcctggattctgt
atgatgtgcaccatgcagaatcacatcacccaggtctttgccaactctgggaacgtcatc
aagcccatcggagtcctcaatgagctcaaacggattgcaaagcatttccgttttggtagc
caagaggacgcccatgagttcctgcggtacacagtggatgctatgcaaaagtcctgcctg
cccggaagcaaattggacaggcaaacacaggcaaccagtttcatccatcaagtctttgga
gggtatctaaggtccagagtaaaatgtttaaactgcaaagcagtctctgacacgtttgac
ccttatttggatgtcgctttggaaataaagactgctcccagtatcaccaaagcactggag
cagtttgttaagcctgagcagctagatggagagaatgcctacaaatgcactaagtgtaag
aagatggttccagcctctaagagattcaccatccaccgcagctccaatgtgctcaccatc
tcactgaagcgcttcgccaactacaacgggggcaagatcgctaaggacgtgaggtatcct
gagtgcctggacctgcgtcccttcatgtctcagtcccacggggagcccctggtctatgtg
ctctacgctgtcctggtgcactctggcttcagctgccacgctggacactactactgctac
gtcaaggctagcaacggccagtggcaccagatgaatgactcctctgtatcagtcagtgac
atcagatcagtcctcaaccagcaggcgtacgtcctcttctatatcaggtcacctgatctg
aagaacggaggggactacaaccacatgagtcggccccctggacaatcgtccccccgcccc
atcctcacaccccgggtcaacattggaccacgacacaccaacacttgcttcataggacca
cagctgcccccacacatggccaagaacacctttcacatcaatgggaacggctccctaagg
gacttcccctctggctcaaagcccagcagtgggagcagcagcatgggcaagactagctac
ggcctgctctcctcttcttcctcttcctctcattctctaagctgtcctacaggtatccct
gacactgccaagcgtcagaagctctccttcttcatcggtcagggcaaacagatccgcccc
tcctcatcatcctcctcttacgcccagccgtcctcctgttcttcgtcacagactacctca
gacatgtccgcgccccgggctccttgcataaacggtacaccctccgttaatggaaacggt
catggagcctcattcctggtgccgtatggccaggagtcatcggaggagtctgaccaggag
ggaggcagcggtttggagaacggcacaaccaagcctcacgttaacgggaggaagggaggg
gccgtctacggccccgtccccagagtgctggccctcaagcccaacggcatcagtaacggc
caggccaccatgcaccataacgggtctgggacaaacggctcctccaaactcagccagatc
ggacatcagaatggacaccacaaagttaatggcatcaaacaaccggagaaggtcaacggt
catgtactgtctcctgggttgggtcccagcagttctaatgaggcggagtctcaccacagt
ggcccaagcaaagaggtgtatagtgccatccccagccaggacaacccgtctcagagcctc
cacagtgccgacagcgatagccacctctccccaaccccagagaaaaggactaaaactcac
tctgaccccctccctcaccacccaccatcaaccactgctaacccgccatcctcattggcc
gatgttggcgctaagccacctactgacaccatgagggaatccagctccacctccaaccct
ggggccttacccctccagcccaccccccactccctcagaaccctagtctctccagccttc
tcccagcccctctctggaccaggccaggggaccacaaaaggcctcggagcaccacacagc
agatctggggaggacgtcagggagactgagaacagcccagcagcagggctggatggacgg
ctggacggcaagcccagctccagagagggaagagaccggatgtattcttctgatcgggat
aaggggagagaccgactatattcttcggaccgcgatagggatggagaccggctgtactct
tctgaccgggataaagacggagaaaggaatgggtaccaccgtgacatgagccgtgaacgc
aactgggaccgtgactcagaccgctatcgacaccggcgggaccacagagatcgagaacac
caccgagaccgagaacaccaccggtcgtaccgtgatcgctcggccagccgggacagacac
tgggagtcagagcgtcgctgggagaggaacgcctaccaccccagggacagggaccgctgc
caccaccactaccacagacccagagagaacagggagagggaccggagggagcacagcctc
ccccatagagaggagcctcacggacgctccaggtggaggggggagaggtgtgaaggtaag
gacaggggtgatggtaagaggggttactacccttcacaggaggagacccccctgcccacc
ccactaagctccaacaccaaaaccagtcagccccccactagcccagacctctccccagcc
agaccagctctggagaaacgacccgatcctctgagagaggacagcgttgaggagcgtcgg
gccaagaaacacaagaagagcaagaagaagaagaagaagtccaaggacaaagctaggcgt
cgagagaatgggacctctgatgtggattcctctgacagggctgccgatggcagcaggtcc
tccaaacacaagaagaagaagaagaggaggcacgacactgacatggaggacgagaagtcc
cgctctacccagagttccgaggggcaccgtgaccccaacgccccccgggagagtcgcagg
gcgagcagcagtgacgaggagagggcgagcaggaagcgacgttaccaggacgatgatggc
tctgacaatagctaccccgagaaacaccatcgctccgatgacgacgacaacaaagaccgc
ttcttctctcacaatatattgccaacagccacctctcacaacgcatcgcaccaccacctc
aacgggcacacaggtaatggcttcagtcgacccaatggaaactcccacggatgttctacc
aatggactgtacaatgaatga
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