KEGG   Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139376753
Entry
139376753         CDS       T10872                                 
Name
(RefSeq) ras-related C3 botulinum toxin substrate 1
  KO
K04392  Ras-related C3 botulinum toxin substrate 1
Organism
ocla  Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04010  MAPK signaling pathway
ocla04145  Phagosome
ocla04148  Efferocytosis
ocla04310  Wnt signaling pathway
ocla04370  VEGF signaling pathway
ocla04510  Focal adhesion
ocla04520  Adherens junction
ocla04530  Tight junction
ocla04620  Toll-like receptor signaling pathway
ocla04810  Regulation of actin cytoskeleton
ocla05100  Bacterial invasion of epithelial cells
ocla05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:ocla00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    139376753
   04310 Wnt signaling pathway
    139376753
   04370 VEGF signaling pathway
    139376753
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    139376753
   04148 Efferocytosis
    139376753
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    139376753
   04520 Adherens junction
    139376753
   04530 Tight junction
    139376753
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    139376753
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    139376753
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    139376753
   05100 Bacterial invasion of epithelial cells
    139376753
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ocla04131]
    139376753
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ocla04147]
    139376753
   04031 GTP-binding proteins [BR:ocla04031]
    139376753
Membrane trafficking [BR:ocla04131]
 Exocytosis
  Small GTPases and associated proteins
   Rho GTPases
    139376753
 Endocytosis
  Lipid raft mediated endocytosis
   Arf6-dependent endocytosis
    139376753
  Macropinocytosis
   Ras GTPases
    139376753
 Others
  NADPH oxidases (Nox) and associated proteins
   Nox associated proteins
    139376753
Exosome [BR:ocla04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   139376753
  Exosomal proteins of other body fluids (saliva and urine)
   139376753
  Exosomal proteins of colorectal cancer cells
   139376753
  Exosomal proteins of bladder cancer cells
   139376753
GTP-binding proteins [BR:ocla04031]
 Small (monomeric) G-proteins
  Rho Family
   Rac/Cdc42 [OT]
    139376753
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU CagD
Other DBs
NCBI-GeneID: 139376753
NCBI-ProteinID: XP_070975751
LinkDB
Position
20:65648567..65658040
AA seq 192 aa
MQAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNLGLWDTAG
QEDYDRLRPLSYPQTDVFLICFSLVSPASFENVRAKWYPEVRHHCPNTPIILVGTKLDLR
DDKDTIEKLKEKKLTPITYPQGLAMAKEIGAVKYLECSALTQRGLKTVFDEAIRAVLCPP
PVKKRKRKCSLL
NT seq 579 nt   +upstreamnt  +downstreamnt
atgcaggccatcaagtgtgttgtagtgggggacggagctgtgggtaaaacatgcctgctc
atcagctacaccaccaacgcgttccccggggaatacatccccacagtctttgacaactac
tctgccaatgtgatggtagatgggaaaccagtgaatctgggtctatgggatacagcagga
caggaagactacgacagactcagaccactgtcctatccacagacggatgtgtttttgatc
tgtttctctctcgtgagtcctgcctcctttgaaaacgtccgtgccaagtggtacccagag
gtgagacaccactgccccaacaccccaatcatcctggtgggcaccaagctggatctgaga
gatgacaaggacaccatcgagaagctgaaggagaagaaactcacccccattacctacccc
cagggtctggccatggcaaaagagattggagcagtaaagtacctggaatgctcagccttg
acacagcgtggccttaagacagtgtttgacgaagccatccgggcggtcttgtgtcccccg
cccgtcaagaagaggaagagaaagtgttcactactctaa

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