Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139376773
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Entry
139376773 CDS
T10872
Name
(RefSeq) COP9 signalosome complex subunit 1 isoform X1
KO
K12175
COP9 signalosome complex subunit 1
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ocla04121
]
139376773
Ubiquitin system [BR:
ocla04121
]
Deubiquitinating enzyme (DUB)
UBL-specific proteases (ULPs)
COP9 signalosome (CSN) complex
139376773
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Gene cluster
GFIT
Motif
Pfam:
RPN7
PCI
CSN1_C
TPR_2
TPR_11
DUF7014
TPR_1
Motif
Other DBs
NCBI-GeneID:
139376773
NCBI-ProteinID:
XP_070975791
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All DBs
Position
20:66188908..66197078
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AA seq
488 aa
AA seq
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MPLPVQVFNFQGVVEPMQIDADPQEDQQNAPDVNYVVENPTLDLEQYASSYCGLMRIERL
QFIAEHCPQLRAEALKMALSFVHRTFNVDVYEEIHRKLTEATREVQGAPDAAVEGGAVEP
PPLDTAWAESTRKKALLKLEKLDTDLKNYKGNSIKESIRRGHDDLGDHYLDCGDLSNALK
CYSRARDYCTSAKHVINMCLNVIKVSVYLQNWSHVLSYVSKAESTPEIAEQRGERDCQSQ
SVLTKLKCAAGLAELASRKYKQAAKCFLLASFDHCDFAELLSPSNVAVYGGMCALATFDR
QELQKNVISSSSFKLFLELEPQVRDIIFKFYESKYASCLKMLDEIKDNLLLDMYLAPHVL
TLYTLIRNRALIQYFSPYVSADMTKMAQAFNTTVLALEDELTQLILEGLINARIDSHSKI
LYARDVDQRSHTFEKSIHMGKEFQRRAKAMILRAAVLRNQIHVKSPPREGSQGELNSANS
QSRMSTNM
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgcctttgcccgtgcaagtattcaactttcagggggttgttgagcccatgcagatagat
gctgacccacaggaggaccagcagaatgcaccagatgtcaactatgtggtggaaaacccc
acgctggacctggagcaatatgcatccagctactgtggtctgatgcgtattgagaggctg
cagttcatcgcagagcactgtccccagctccgtgccgaggccctgaagatggccctgtct
tttgtccacaggaccttcaacgtagacgtgtacgaggagatccaccgcaagctcacagag
gccaccagagaggtccagggggctccagatgctgcggtggagggcggggcagttgaaccc
cctcctctggacacagcgtgggccgagtcgaccaggaaaaaggccctgctcaaactggag
aaattggacactgacctgaagaactacaaaggcaactccatcaaagagagcatcaggagg
ggtcatgatgaccttggggaccactacttggactgcggtgatctcagcaacgcccttaag
tgctactcccgagcccgagactactgcactagcgccaagcatgtcataaacatgtgtctt
aatgtcatcaaggttagcgtctacctccagaactggtcccacgtccttagctatgtgagc
aaagctgaatccactccggagatagcagagcaaagaggggagagagattgccagagtcag
tcagtcctcaccaaattaaaatgtgctgcaggcctagctgagctggcctccagaaagtac
aaacaagcagccaagtgcttcctgctggcctctttcgaccactgtgacttcgctgagctc
ctgtcccccagcaatgtagctgtgtacggagggatgtgtgccctcgccaccttcgacaga
caggagctacagaagaacgtaatctcaagcagctcctttaaattattcttagagttggag
cctcaggtccgtgacatcatctttaagttctatgagtcaaagtacgcttcctgtctcaaa
atgctggatgagatcaaggataacctgctgttagacatgtacctggccccccacgtactg
accctctacacactgatcaggaacagagcccttatacagtacttcagcccgtacgtgtct
gcagacatgactaagatggcccaggccttcaacaccacggtgctagctctggaagacgaa
ctcacccagctcatactggagggacttatcaatgcacgcatagactcccacagcaagatc
ctgtatgcgcgtgacgtggaccagcggagccacacatttgagaagtctatccacatgggc
aaggagttccagaggcgagccaaagccatgatcttgcgagctgctgtgctgcgcaaccag
atacacgtcaagtctcctcccagggagggcagccaaggcgaactcaactctgccaacagc
caatcacgaatgagcaccaacatgtga
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