Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139376874
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Entry
139376874 CDS
T10872
Name
(RefSeq) F-box only protein 11-like isoform X1
KO
K10297
F-box protein 11
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ocla04121
]
139376874
Ubiquitin system [BR:
ocla04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
139376874
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta_helix
NosD
F-box-like
F-box
zf-UBR
Motif
Other DBs
NCBI-GeneID:
139376874
NCBI-ProteinID:
XP_070975945
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All DBs
Position
20:complement(72260821..72292195)
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AA seq
880 aa
AA seq
DB search
MNSVRATSRRPRRVSRPRPVQPERNNQERDEDVPADMVAEESGPGAQNSPYQLRRKSLLP
KRTAACPAKTNMEGASTSATEDFGHRAKRARVSGKSQDLPAAPAEHYLEEKLPDEVVLKI
FSYLLEQDLCRAACVCKRFSELANDPILWKRLYVDVFEYTRPMMHPEAGKFFQINPEEYE
QPNPWKESFQQLYKGAHVKTGFAEHFYSNPARYKGRENMLYYDTIEDALGGVQEAHFDGL
IFVHSGVYTDEWIYIESPITMIGAAPGKVADKVIIENTRDSTFVFMEGSEDAYVGYMTIK
FNPDDKSAQHHNAHHCLEITVNCSPSIDHCIIRSTCTVGSAVCVSGQGACPTIKHCNISD
CENVGLYITDHAQGIYEDNEISNNALAGIWVKNHGNPIIRRNHIHHGRDVGVFTFDHGMG
YFESCNIHRNRIAGFEVKAYANPTVVRCEIHHGQTGGIYVHEKGRGQFIENKIYANNFAG
VWITSNSDPTIRGNAIFNGNQGGVYIFGDGRGLIEGNDIYGNALAGIQIRTNSCPIVRHN
KIHDGQHGGIYVHEKGQGVIEENEVYSNTLAGVWVTTGSTPVLRRNRIHSGKQVGVYFYD
NGHGVLEDNDIYNHMYSGVQIRTGSNPKIRRNKIWGGQNGGILVYNSGLGFIEDNEIFDN
AMAGVWIKTDSNPTLRRNKIHDGRDGGICIFNGGRGLLEENDIFRNAQAGVLISTNSHPV
LRKNRIFDGFAAGIEITNHATATLEGNQIFNNRFGGLFLASGVNVTMKDNKIMNNQDAIE
KAVSRGQCLYKISSYTSYPMHDFYRCHTCNTTDRNAICVNCIKKCHQGHDVEFIRHDRFF
CDCGAGTLSNPCTLAGEPTHDTDTLYDSAPPIESNTLQHN
NT seq
2643 nt
NT seq
+upstream
nt +downstream
nt
atgaactccgtcagagcaaccagcagaagacccaggcgagtgtcgaggccgcgcccggta
cagccggaaaggaacaaccaggaaagagatgaggacgtccctgcagatatggttgcagaa
gaatcaggtccaggagctcagaatagtccgtaccaacttcgaagaaagtctctactaccc
aagagaacagcagcgtgtccagcaaagactaacatggagggtgcttccacttcagccaca
gaagactttggccatcgggcaaaacgtgcccgagtgtcaggaaagtctcaagatttacca
gcagcgcctgcggagcactacctcgaggagaagctgccagacgaggtggttctgaagatc
ttctcctacctgctggagcaggacctgtgtcgcgcagcatgtgtctgcaaacgcttcagt
gaactggccaatgaccccatcctctggaagaggctgtacgtggatgtgtttgagtacacg
cgtcccatgatgcaccctgaggcggggaagttcttccagattaacccagaggagtacgag
cagcccaacccatggaaagagagctttcagcagctgtataaaggagcacatgtgaagacg
ggcttcgcagaacacttctacagtaatcctgccagatacaaaggaagagagaacatgctt
tactatgacaccatagaggatgcactggggggtgttcaggaggcccactttgacggcctc
atattcgtccactcaggggtctacactgacgagtggatctacatagaatcacccatcaca
atgatcggagctgcacctggtaaagtagcggacaaagtgatcattgagaacaccagagac
tccacgtttgtcttcatggagggctcagaggacgcgtacgttggctacatgaccatcaag
tttaatcctgacgataagtctgcccagcaccacaacgcccaccactgtctggagattaca
gtcaactgcagccccagcattgaccactgtatcatacgcagcacttgcacagtgggctca
gcggtctgtgtgagcggccagggagcttgtcccaccattaaacactgcaacatcagcgac
tgtgagaacgtggggctttacattaccgaccatgcacagggtatctatgaggacaacgag
atctccaacaacgctctggctgggatctgggtgaaaaaccatggcaaccccatcatcaga
cggaaccacatccaccatggcagagacgtgggcgtcttcactttcgaccacggcatgggc
tattttgagagctgcaacatccacaggaaccgcatagctggcttcgaggtgaaggcgtac
gccaaccccacggtggtgcgctgtgagatccaccacggacagacgggagggatctacgtg
cacgagaagggccgaggacagttcatcgagaacaagatctatgcaaacaactttgctgga
gtgtggatcacctccaatagtgatcctacaataaggggcaacgcaatcttcaacggtaac
cagggtggagtttacatattcggtgatgggcgaggcctcatcgaggggaacgacatctac
ggtaacgccttggcagggatccagatcaggacaaacagctgccccatcgtacgacacaac
aagatccacgacggacagcatgggggcatctatgtgcatgaaaagggacagggggtgata
gaggagaacgaggtgtacagcaacacgctggcaggagtctgggtgactacaggaagcaca
cctgtcctcaggaggaaccggatacacagtgggaaacaggttggtgtctacttctatgac
aacggccatggggtgttggaggacaatgatatctacaaccacatgtactccggagttcaa
atcagaactggcagcaatcccaaaatcagacggaacaagatctggggaggtcaaaatgga
ggcattctggtttacaactcaggtttgggcttcatcgaggacaatgagatctttgacaac
gccatggcgggggtgtggataaagactgacagcaaccccactctccgaaggaataagatc
cacgacgggagagacggaggcatctgtatattcaacggaggacgaggtttactggaggag
aacgatatcttcaggaacgcccaagcaggggttctcatcagcaccaacagccaccccgtc
ctgaggaagaacaggatatttgacggcttcgctgcaggtattgagatcaccaatcatgcc
acggcaaccctggagggcaatcagatcttcaataaccgctttggagggttgtttctcgca
tctggtgtcaacgttacaatgaaagataacaaaataatgaacaatcaagatgccattgaa
aaagctgtgagcagaggtcagtgcctgtacaagatttcaagttacaccagctatccaatg
cacgatttttacaggtgtcacacctgtaacacaacagaccgcaacgccatctgtgtgaac
tgcatcaagaagtgccaccaggggcacgacgtcgagttcattaggcatgatagatttttc
tgtgactgtggagccgggacgttgtcaaacccatgcacgctagccggagagcccacgcat
gacacagacacactgtacgactcagcccctcctatagagtccaatacgctgcaacacaac
tga
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