Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139376889
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Entry
139376889 CDS
T10872
Name
(RefSeq) proteasome activator complex subunit 4B-like isoform X1
KO
K06699
proteasome activator subunit 4
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
139376889
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
ocla03051
]
139376889
Proteasome [BR:
ocla03051
]
Eukaryotic proteasome
Regulatory particles
PA200
139376889
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_PSME4_mid
HEAT_PSME4
PSME4_C
HEAT
TPR_Trm732_C
HEAT_2
Filament
Motif
Other DBs
NCBI-GeneID:
139376889
NCBI-ProteinID:
XP_070975979
LinkDB
All DBs
Position
20:complement(73950767..74016524)
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AA seq
1847 aa
AA seq
DB search
MKEDVSEKLGFVPQKDIVYNKLLPYADILDEESNDLLGKIKGNLGRAVQLREIWPGVLFW
TRKLSTYMRLYGRKFSKEDHVLFIQLLYELITIDKLEISMMQGLARLLINLLKKRELLSR
EDLELPWRPLYELQDRILYSKTEHLGLNWFPNSLRPRASSKHVMIKLFQRCSVENVLKTL
VRSCRPYFPESATQEMLEEWRPLLCPFDVTMQRAIGYFELFLPTTLPPELHHKGFKLWFD
ELLSLWVAVQNLPGWEVHLVNLFARLANDNIGYIDWDPYIPKIFTRILRSLNLPVGTSQM
LVPRYLTNAYDVGHVVLWVSALLGGPSKQAQAQLSGLFNSITSFFHPSNHGRWLMKLMKL
LQRLPASVVRRLHRERYRKPTWLTPVPDSHKMTEADITAFVESMMQPVLLAMFSKTGSLD
AAQALQNLALMRPELVIPPVLEKTYPAMETLTEPHQLTATLSCMIGVARSLVSGGQRFPE
GPTHMLPLLMRALPGVDPNDFSKCMITFQFIATFATLVPLVDCSSAVHERSDLTEVEREM
CSASAEFEDFVLQFMDRCFALIDSSTLEQTREETETEKMTHLESLVELGLSSTFSTILTQ
CSIDIFKVALEKVFNFATTNIFETRVAGRMVADMCRAASKCHPAQSLKLFVPHCCNAINQ
IAVNEEVLSEEELDKELLWNLQLLSEVTRVDGDKILPYSTQLVQILQLTLHLKCKQGYTL
ACNLLHHILRSTALIYPTEYCSVPGGFQQPTQDYLPIKDWGRPGDLWNLNIQWHVPRVEE
TSFVFYVLDLILQPELLRLQRYAQGERDMTRDDVLQSLSIVQHCLLGAGSLLPLLQGEPI
PELVTSMVNLGETNLFTGMADDVSRENYRDAICRVMRQLLHHILEHSEDDTKSLFSIIKI
ISDLLHFKGSHKQEFDSRWKSFNLVKKSMENRLHGRKQHIRALLIDRVMLQHELRKLTVE
GCEYKSIHQELMRDLLRLSTSTYSQVRSRAQSVLFTALGTYNFCCRDLIPRVLEFLEPDR
SDVTQQQFKGALYCLLGNHSGVCLANLHDWDCITLTWPAIVRSGLSSAMSLEKPSIVRLF
DDLADKVHRQYETIGIDFAIPSECRAAAVQLQTSGVPLPQDPVPSDQEEAEGLRKQEEKN
LDSVQKYESLVGELLDCLNDRNMPWKFEHNAIGFMSLLLRDDHPLPSPAVLFFVKSLNHD
SLLVRKLAISAVAGIMKQLKRPHKKVPVSPNELCGLKEPAGMIAGDRPDNQWLQYNSSSL
PRTQQDWEGCTFVEKTHWGYYSWPQKLMMYSPSEEQPKQGLTREEMTEREQIIYDHFSDP
VFINQLIEFLSLEDRKGKDKFSPRRFCLFKGLFRNFNDAFLPVLKPHMERLVADTHESKQ
RCVAEITSGLIRGSKHWSYGKVESLWELLCPLLRTALNNITVETYADWGTCIATACESRD
PRKLHWLFEMLMESPVNGEGGSFVDACRLYVLQGGLAQQEWRVPELLHRLLQYLEPKLTQ
VYKNVRERIGSVLTYIFMIDVNLPYTQPTASPRIKEFTERVLLRLKPLTEGDEEIQNHVV
EENDVGEQDERTQAIKLLKTVLKWLMASAGRSFSTAVPEQLQLLPLLFKIAPVENDDSYD
ELKRDAKTCLSLMSQGLLYTEQIPLVLLALQEIAGSSSWHARYTVLTYLQIMVFYNLFTF
LSDQGAVNDVRALVIRLLEDEQLEVREMAATTLSGFLQCNFLSIEGPMQSHFEALCKTRL
PKKRKRELGSVVDTIPSGDLVRRHAGVLGLSACILSSPYDVPTWMPQLLMDLSAHLNDTQ
PIEMTVKKTLSNFRRTHHDNWQEHKQQFTDDQLLVLTDLLVSPCYYA
NT seq
5544 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaagacgtgtcggagaaattaggatttgtccctcaaaaagacatcgtctacaac
aaacttcttccatacgcggatatattagacgaggaatccaatgaccttttgggtaaaatc
aaaggaaacttgggccgggctgtccagcttcgagagatatggccgggtgtcttgttttgg
acaaggaaactttccacgtacatgcggctgtacggcaggaagttcagcaaggaggaccat
gtgctgtttatccagctgctgtacgagctgatcaccatcgacaagctggagatcagtatg
atgcaaggactagcccggctgctcatcaacctccttaagaaaagagagctgctgtcgcgg
gaggatcttgagttgccttggagacccctgtatgagctgcaagacaggatcctctactca
aagactgaacacctgggactaaactggttccccaattccctacggcctcgtgcttcctct
aaacacgtaatgataaaattgtttcagaggtgctcggtggaaaacgttttgaaaacactt
gtgagaagctgcagaccgtacttcccggagtcggccacccaggagatgttggaggagtgg
cgtccactgctctgtccatttgatgtgaccatgcagagagctataggatactttgagctc
ttcctccccaccaccctacccccagagctgcaccacaagggctttaagttatggtttgat
gaactcctcagcttgtgggtggcagtacagaaccttccaggttgggaggtgcatcttgtc
aacctgtttgcccggttggccaacgacaacattggctacattgactgggacccttatata
cccaagatcttcaccagaatcctacgtagtctgaacctcccggtggggaccagtcagatg
ctggttcccagatacctgacaaacgcctacgacgtcggacacgtggtcctctgggtctca
gctttactgggaggccccagtaagcaagcccaggctcagctcagtggccttttcaacagc
atcacatctttcttccacccatccaaccatggacgctggctgatgaagttgatgaagctg
ctgcagcgcctcccggccagtgtggtgcggcggctccaccgggagcgctaccggaaaccc
acgtggctcacgccggtaccggacagccacaagatgacagaggcggacattacggcgttc
gtggagagtatgatgcagccggtgctcctggccatgttcagtaagacaggcagtctggac
gctgctcaggccttgcagaacctggccctcatgaggcccgaacttgtcataccaccagtg
ctggagaaaacctaccctgctatggagacactgacagagccccaccaactgactgccacc
ctgagctgtatgatcggtgtggctcgcagcctggtgtctgggggccagcgcttccccgag
ggccccacacacatgctgcccctcctcatgcgggcccttcccggggtcgaccccaacgac
ttcagcaagtgcatgataacattccaattcattgctacgtttgcgactcttgtgcctttg
gtggactgttcatctgctgttcatgaaaggagcgacctgacagaggtggagagagagatg
tgctcagcctctgcagagtttgaggactttgttcttcagttcatggacaggtgttttgcc
ctgatagacagcagtactctagagcagaccagagaggagacagagacagagaagatgacc
catctggagagcctggtggagctgggactatcttctaccttcagcaccatcctcacacag
tgctccatagacatcttcaaggtggctctggagaaggtcttcaactttgccaccaccaac
atctttgagactcgtgtggctggcaggatggtggctgacatgtgcagagcagcttccaag
tgtcacccggcacagtctctgaagctttttgtgccccactgctgcaatgccataaaccag
atcgctgtcaatgaagaggtgttgagtgaggaggaactggataaggagttactatggaac
cttcagctactgtcagaggtgactcgtgtggacggggacaagatcctcccctacagcacc
cagctggttcagatcctgcagctgaccctccacctgaagtgtaaacagggctacaccctg
gcctgtaacctgctgcatcatatcctgaggtctacagccctcatctaccccacagagtac
tgcagtgtacctggaggctttcagcagcccacacaggactacctgcccatcaaggattgg
ggtcgtccgggggacctgtggaacctgaacatccagtggcacgtccccagagtggaggag
accagctttgtgttctacgttctagacctgatcctacagccagagctgctccgactacag
agatacgcccagggggaacgggacatgaccagggatgacgtcctacagagtttgtccatt
gtacagcactgccttctgggagcaggtagcctgttgcccctgctgcaaggagagcccatc
cctgaactggtgactagcatggtgaatctgggggagactaacctcttcacagggatggcc
gatgatgtgtccagagagaactacagagatgctatctgcagagtgatgaggcagctgcta
catcacattctggagcactcagaggacgacaccaagtctctgttctccatcatcaagatc
atcagtgacctgctgcacttcaaaggctcccacaaacaagagtttgactctcgctggaag
agcttcaacctggtcaagaagtccatggagaacaggcttcacggcaggaagcagcacatc
cgagccctgctaatcgacagagtcatgctacagcacgagctgcgtaagctaacagtggag
gggtgtgagtacaagagtatccaccaggaactgatgcgggatctgctgcggctctctacc
agcacctacagtcaggtgcgtagccgggctcagagtgtgctgttcacagctctggggacc
tataacttctgctgccgggacctgatcccccgtgtgctggagttcctggagccagaccgc
tccgacgtcacacaacagcaattcaaaggtgccttgtactgtctcttggggaaccacagt
ggggtgtgcctggccaacctgcacgactgggactgcatcaccctgacctggcctgccatc
gtccgctcaggactcagctcagctatgtccctggagaagccctccatcgtccgcctgttt
gacgacctcgctgacaaggtccaccgccaatacgagaccattggcatcgactttgctatc
ccgtcagaatgtcgggcagcggcggtgcagctccagacctccggtgttcccctgcctcag
gaccctgtcccctcagaccaggaagaagcagagggcctcaggaagcaggaggagaagaac
ctcgactcagttcagaaatatgagagtctggttggtgaacttctggactgcctcaacgac
agaaacatgccctggaagtttgagcacaatgccattggattcatgtctctgttgctgaga
gatgaccaccctctcccctcccctgctgtcctgttctttgtcaagagcctcaaccacgac
tcgctcctggtccgcaagttggcgatatcagcagtggcagggatcatgaagcaactcaag
aggccgcataaaaaagtaccagtcagccccaacgagctctgtggtctaaaggagccggcc
ggtatgatagcaggagacaggcctgataaccagtggctccagtataacagtagcagtcta
cctcgtacccagcaggactgggagggctgtacattcgtagagaagacccactggggatac
tacagctggccacagaaacttatgatgtactctccctcggaggagcagcccaaacaggga
ctgaccagagaggagatgacagagcgagagcagatcatctacgaccacttttcagaccca
gtgttcatcaaccagctgattgagttcctctctctggaggaccggaagggcaaggacaag
ttcagcccccgcaggttctgccttttcaagggtctgttccgtaacttcaacgatgccttc
ctgcccgtgctgaaaccacacatggagcgtctggtggccgacacacacgagagcaaacag
cgctgtgtagcagagatcacttctggactgatcagaggcagcaagcactggagctacggc
aaggttgagagtctgtgggagctgctgtgtcctctgctccgtacagcactgaacaacatc
actgtagagacctacgctgactggggcacctgcatcgccaccgcctgtgagagcagagac
cccaggaagctccactggctgtttgagatgctgatggaatctccagtcaacggggagggg
ggatccttcgtagacgcctgtcgtctgtatgtgctgcaggggggcctggctcagcaggag
tggagagtccctgagctgctccacagactgctgcagtacctagagcccaaactcacacag
gtctacaagaacgtccgcgagcgcatcggcagtgtcctcacctacatcttcatgatagac
gtcaacctgccgtacactcagcccacagcctcgcctcgcatcaaggagttcacagagcgg
gtactgctgcgcctcaaacccctaacggagggggacgaggagatccagaaccacgtggta
gaggagaacgatgtgggggagcaggacgagaggacacaggccatcaaactactgaagaca
gtactcaagtggctgatggccagtgccggacgctccttctccacggctgttccagagcag
ctccagttgctgccactgctgttcaagatcgctccggtggaaaatgatgacagttatgat
gagctgaagcgggacgctaagacctgtctgtctctgatgtcccagggactgctctacaca
gagcagataccactggtcctactggccctgcaagagatagcgggcagcagttcgtggcat
gctcgctacacggttctgacgtacctacagatcatggtcttctacaacctgttcaccttc
ctgagcgaccagggagccgtcaacgacgtcagagcactggtcatacgcctgctggaggac
gagcagctagaggtgagggagatggctgccaccacgctgagcggtttcctgcagtgtaac
ttcctgtccatagagggccccatgcagagccacttcgaggccctctgcaagacccgcctg
cccaagaagcggaagagggagctgggctccgtggtggacaccatcccctccggagatctg
gtgcggcgtcatgctggagtgttaggtctgagtgcctgtatcctgtccagcccctacgat
gttcccacctggatgccccaactactgatggacctcagtgcccacctcaatgacacacag
cccattgagatgacggtgaagaagaccctgtcgaactttagacggactcatcatgacaac
tggcaggagcataaacagcagttcactgacgaccagctgctggttctgaccgatctgctg
gtctctccctgctattacgcctag
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