Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139376912
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Entry
139376912 CDS
T10872
Name
(RefSeq) exportin-5-like
KO
K14289
exportin-5
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
139376912
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ocla03016
]
139376912
03036 Chromosome and associated proteins [BR:
ocla03036
]
139376912
Transfer RNA biogenesis [BR:
ocla03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
139376912
Chromosome and associated proteins [BR:
ocla03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Other miRNA pathway proteins
139376912
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exportin-5
Xpo1
IBN_N
Motif
Other DBs
NCBI-GeneID:
139376912
NCBI-ProteinID:
XP_070976006
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All DBs
Position
20:complement(75651048..75686156)
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AA seq
1221 aa
AA seq
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MGEPVSEMCDHLIKAVNVMMDAESSQIYRLEALKFCEEFKEKCPFCVPCGLQLADKAQTA
VVRHFGLQILEHVIKFRWNNMPQQEKVQLKNCAMGLLSSGTYPILEEESHIKDVLARIIV
EMIKREWPQHWPDMLKEMEALTSIGEAQTELVMMILLRLAEDVITFQTLPAQRRRDIQQT
LTQNMESIFSFLLTILQLHVDEYRKLKKIPGQELQAKAHCRVGVAALNTLAGYIDWVALA
HLTNDNCRLLEMLCLLLSETELQLEAAECLLIAISRKGKLDDRKPLMVLFDDVAMHYILS
AAQSADGAATYNTSSPTQPVVERHYIFLKRLCQVLCSLGSQLCFLVGSGVEVDVPANLSK
YTEAFLAFTTHPSQFLRSSTQITWGTLFRHEILSKDPVIIQMMIKYFRATMTNLVKTGFP
SRNDSPSCEYSRHDFDSDEDFNSFFNSFRAQQGEAVRNACRVVPLEGFQIAAEWLQYQIS
TPIDIGTTGSKMAEGLCSILSPSAVQWDAMTFFTESVVGQIFKNVEVEKLPVDQGIELLQ
AVLNYNTQDPLILSCVLTNLSSLFPFVTHRPHFLPQVLYKLFASITFEVVEESKAPRTRA
VKNVRRHACSSIIKMSRDYPWFILPCFDILYNQVKKLFSNEALLTQMEKCALIEALVLIS
NQFKDYTKQKAFLEELMATVAARWTSDEMRQVLLEPALFLAFVGADQLMAEGTDHTTGIN
RSRLSFCVYTILGVVKRARWPADLEEAKAGGFVTGYTPSGAPIYRNPCTPQVLALLPNLL
ALIRTHNNLFLPENMCRLSETFSRAYEVIEVERKVVLGLTQPVLDIYDSPVYKTHLERMQ
GFFCTLYDNCYHILGNAGLSLHQDFYTIEGLAEQIVGSALISLDNVPDHRLRPMLRVFLK
QLVLSCPQEYYDSLLCPLLGPLFAYMLQRLNLRWQIINQRSTVSMEEDEDEACEENQVTQ
EMLEEQLVRLVTREVLDLLTHACILKKVPEPAGNKEDVDEDEMMSTESQAVTASPAQPTG
EMTELGKCLLKHEDIYMTLLTISFTSLSWKDTSNCHRTASMVCWTLLRQVVGGNLLPEAV
TWFYASVLKGLQMHGQHEVCNSALTQLALIIYDNLRPRYMELRSVMTQIPSINLEALDQY
DQRLLEPSSAQKVGEKKRKDQFKKLIAGTVGKDLGQQFKKEVHIRNLPSLFKKPKLEKRD
IVEPSETGSLAALFSPTQDDI
NT seq
3666 nt
NT seq
+upstream
nt +downstream
nt
atgggtgaaccagtgtctgaaatgtgtgatcacctcatcaaagctgttaacgtgatgatg
gacgcggaatctagtcaaatatatcgtctggaggccctaaagttttgtgaagaattcaaa
gagaagtgtccattctgtgttccatgtgggctacagttagcagataaagcccaaacagca
gtggtgaggcactttggtctacagatactggagcacgtcatcaagttcagatggaacaac
atgccacagcaggagaaagtccagctgaagaactgtgccatggggctgttgtcatctggc
acatatcctatcctggaggaggagagtcacatcaaggacgttctcgcacggatcatagta
gagatgatcaagagagaatggcctcagcactggcctgacatgctcaaggagatggaggca
ctgaccagcataggggaggcccagacagagctggtgatgatgatcctgctgcggctggcg
gaggacgtgatcaccttccagacgctgcccgcccagcgccgcagggacatccagcagacc
ctcacccagaacatggagagcatctttagcttcctgctcaccatcctgcagctccacgtc
gacgagtaccgcaaactgaaaaaaataccaggccaagaattgcaggccaaggcccactgt
cgtgtaggcgtggctgctctgaacaccctggcaggctacatagactgggtggccctggcc
cacctcaccaatgacaactgtcgcctgctggagatgctatgtctgctgctcagtgagaca
gagctgcagctggaggctgccgagtgcctgctcatcgccatcagccgcaaggggaagctg
gatgacaggaaaccgctcatggtgctgtttgatgatgtcgccatgcactacatcctgtct
gcagcacagtctgcagatggagcagcaacgtacaacacatcctctccgacacagccagtg
gtggagagacactacatcttcctgaagaggctttgtcaggtcctgtgttcccttggcagc
caactctgcttcttagtgggttcaggtgtggaggtagatgtacctgcaaacctcagcaag
tacacagaagcattcctggccttcaccactcacccaagccagttcctaagatcttccacc
cagatcacatggggaaccctgttcagacatgagattctctccaaggatcctgtcatcatc
cagatgatgatcaagtacttcagagccaccatgaccaacctagtcaagactggtttccct
tccaggaacgacagtcccagctgtgagtactcccgtcatgacttcgacagtgatgaagac
ttcaactccttcttcaactcgttccgagcgcagcagggggaggcggtccggaatgcgtgt
cgcgtcgttcccttggagggcttccagattgcagcagagtggctgcagtatcagatcagt
acacccattgacatcgggaccactgggtctaagatggcagaggggctgtgctctatcctg
tctccgtcagcggtccagtgggatgctatgaccttcttcacagagagtgttgtgggacag
atcttcaagaacgtggaggttgagaagttgccagtagatcagggcattgagctgctacag
gcagtgttgaactacaacacccaagaccctctcatcctgtcctgtgtcctcaccaacctc
tcctccctcttcccctttgtcacacaccgacctcacttcctgcctcaggtcctctacaag
ctgtttgcctccatcacatttgaggtggtagaggagagcaaggcgccacggacgcgtgcg
gtgaagaacgtcagaagacacgcctgctcctccatcatcaagatgtctcgagattaccca
tggttcattctgccatgttttgacatactgtataatcaggtgaagaagctgttctccaac
gaggccctgttgacccagatggagaagtgtgctctgatagaggctctggtcctcatcagt
aaccagttcaaagactacaccaagcagaaggccttcctggaggagctcatggccaccgtg
gctgctcgctggacctccgacgagatgaggcaggtactgttggaacctgctctgttcctg
gctttcgttggtgctgatcagctgatggctgaaggcacagaccacacaacaggcatcaac
aggtcacggttgagtttctgtgtatacaccatcctgggggtggtgaagagagcgcgctgg
ccggctgacctggaggaggctaaggcggggggcttcgtgacgggctacaccccttctggt
gccccaatctacagaaacccctgcaccccccaggtcctggccctgctgcccaacctgctc
gccctcatcagaacccacaacaatctgttcctgccggagaacatgtgtcgtctgagtgag
acgttctccagagcctacgaggtgattgaggtggagaggaaggtggttctaggccttaca
cagccagtcctggacatctatgactctccagtgtacaagactcatctggagcgcatgcag
ggtttcttctgtaccctctatgacaactgttaccatatcctggggaatgcaggcctatca
ttgcatcaggacttctacaccatcgagggattggctgaacagattgttggttccgcctta
atctccctcgacaacgtgcctgaccacagactccgccccatgctccgggtgttcctgaag
cagctggtgctgtcgtgtcctcaggagtactacgacagtctgctctgccccctactgggc
cctctgttcgcgtacatgcttcagagactcaacctcaggtggcagatcatcaaccagcgg
agtactgtcagtatggaggaggacgaggacgaggcgtgtgaggagaaccaagtcacccag
gagatgctggaggaacagctggttcgtctggtcaccagagaggttctggacctgctcact
cacgcctgcatactgaaaaaagttcctgagccagcagggaataaggaggatgtggatgag
gatgagatgatgtccactgagtcccaggcagtcacagcctctccagcccagccaacaggc
gaaatgactgagctggggaagtgtctactcaaacatgaggacatctatatgaccttgttg
actatctcgttcacctctctgtcctggaaggacaccagcaactgtcaccgcactgcctcc
atggtgtgctggaccctgctgcgacaggtcgtaggggggaaccttctaccagaggcggtc
acatggttctatgccagtgttctgaaaggactgcagatgcacgggcagcacgaggtctgt
aactccgccctcacacaactggccctgattatatatgacaacctgcggccacgatacatg
gagctaaggagtgtgatgactcagatccccagcatcaatctggaggctctggaccagtat
gaccagcggctgctggagcccagctctgcccagaaggtgggagagaagaagaggaaggac
cagttcaagaagctcattgccggcactgtggggaaagatctgggccagcagtttaaaaag
gaggtacatatcagaaatctcccatctctctttaagaagcccaagctggagaaaagggac
attgtagagcccagtgagactggatctctagcagctctcttctccccaacacaggacgac
atctag
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