KEGG   Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139376961
Entry
139376961         CDS       T10872                                 
Name
(RefSeq) serine/arginine-rich splicing factor 2-like
  KO
K12891  serine/arginine-rich splicing factor 2/8
Organism
ocla  Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla03040  Spliceosome
ocla05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:ocla00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    139376961
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    139376961
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ocla03041]
    139376961
Spliceosome [BR:ocla03041]
 Common components
  Common spliceosomal components
   SR proteins
    139376961
SSDB
Motif
Pfam: RRM_1 RBD_AKAP-17A RRM_PARP14_3 RRM_3 RRM_occluded RRM_8 Beta-prop_SCAP
Other DBs
NCBI-GeneID: 139376961
NCBI-ProteinID: XP_070976089
LinkDB
Position
20:complement(78259299..78264196)
AA seq 209 aa
MSYGRPPPDVEGMTSLKVDNLTYRTSPETLRRVFEKYGRVGDVYIPRDRYTKESRGFAFV
RFHDNRDAEDAMDAMDGALLDGRELRVQMARYGRPPDSHFGRRGGGGPPRRHGGYGRRSR
SRSASPRRRRRSRSRSRSRSRGRDYSRSRSRSYSRSRSKSRTPRKSKSPSRSRSRGASRS
RSPASNRGSKSRSRSKSRPKSPEDNGTDS
NT seq 630 nt   +upstreamnt  +downstreamnt
atgagctacggaaggcccccgcccgatgtcgagggtatgacctcgctcaaagtggacaat
ctcacctaccgaacttctcctgagacactacgacgagttttcgagaagtacggccgggtg
ggagacgtgtacatcccccgcgatcggtacaccaaggagagccgcgggttcgctttcgtg
cggttccacgataaccgcgacgctgaagacgcgatggacgcgatggacggggccttgctt
gacgggcgggaactgcgagtccagatggcgcgctatggccgtccaccagactctcacttc
gggcgccgaggcggcggtggacctccaaggaggcacggaggctatggtcgcaggagcagg
agtcgttcggccagcccccgtcggcgcagacgcagtcgttcccggagcaggagccgctcc
cgtggccgtgactacagccgctcccggtctcgttcctactctagatcccgttccaagtcc
cgcacaccccgcaagagcaagtccccatctcggtcgaggtcccgtggtgcttccaggtcc
cgcagcccggcttccaacagaggctccaaatccaggtcgcggtccaagagcaggcccaag
tcccccgaggacaacggaaccgactcttag

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