Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139376964
Help
Entry
139376964 CDS
T10872
Name
(RefSeq) Na(+)/H(+) exchange regulatory cofactor NHE-RF1-like
KO
K13365
sodium/hydrogen exchange regulatory cofactor NHE-RF1
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
139376964
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ocla02000
]
139376964
Transporters [BR:
ocla02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
139376964
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EBP50_C
PDZ
PDZ_6
PDZ_2
GRASP55_65
Motif
Other DBs
NCBI-GeneID:
139376964
NCBI-ProteinID:
XP_070976093
LinkDB
All DBs
Position
20:78341776..78373614
Genome browser
AA seq
355 aa
AA seq
DB search
MSNLRPRCCILGKGSNGYGFHLHGEKGKTGQFIRLVEPDSPAATAGLFAGDRLTFVNGDS
VEGESHQQVVARIRATVGSLELIVVDAETAEVLKKHNLECRKEYVTEGIPLPGSKSGHGD
AAESEATATSAENGNFSLQRLSVSAKDSKAELRPRLCSMKKGATGYGFNLHSEKSKPGQY
IRAVDEESPADKAGLKPQDKIVQVNSKSVAGMQHSEVVAAIKAGGDETSLLVVDREAEAF
FNSCNVIPTEAHLTGPLPEPVSNGGAEEEELDGKVAVKPKVSVSASTSSTTSTASLPTSA
ASTPPPEVRVPPVKEPNASLSMSLAQAKERAHQKRSSKKAPAMDWSKRNELFSNL
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaacctccggcctagatgttgtattttaggaaagggttcgaatggctacggcttc
cacctgcacggtgagaaagggaagaccggacagtttatccgactggtagaaccagactct
cctgccgccaccgccggtctcttcgctggggaccgactgacgttcgttaacggggacagc
gtggagggtgagagccaccagcaggtcgttgcccggatacgagccaccgtgggcagcctc
gagctgatcgtggtagacgctgagaccgcggaggtactgaagaagcacaacttggagtgc
cgtaaagagtatgtcacggagggcattccgttaccgggcagcaagtcgggccatggggat
gcagcggagagcgaggcgactgctacatcggcagagaacggaaacttctccctacagagg
ctaagtgtgagcgccaaggactcaaaggcagagctgcgtcctcgtctgtgctcgatgaag
aagggtgcgacgggctatggcttcaacttgcacagtgagaagtctaaaccgggccagtac
attagagctgtggacgaggaatctcctgctgacaaggctggtctcaaaccgcaggacaag
atagtacaggttaacagtaagtcagtagcagggatgcagcacagtgaggtggtagcagcc
atcaaggccgggggagatgagaccagtctactggtggtggatcgtgaggcagaagctttc
ttcaacagctgcaacgtcattcctactgaggcccacctcacaggacctcttcctgaacct
gtgtccaatggaggagcagaagaagaggagctggatggtaaggtagcagtaaagcctaag
gtgtctgtcagtgcatcgacatccagcaccacctccactgcctctctaccaacatccgct
gccagcacccctccaccagaggtccgggtgcctccggttaaggagcctaatgcgagcctc
agcatgtctctagcccaggccaaggagagagctcaccagaaacgctcatccaagaaggcc
cctgccatggactggagcaagaggaacgaactcttcagtaacctataa
DBGET
integrated database retrieval system
