KEGG   Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139376968
Entry
139376968         CDS       T10872                                 
Name
(RefSeq) charged multivesicular body protein 6-like isoform X1
  KO
K12195  charged multivesicular body protein 6
Organism
ocla  Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla03250  Viral life cycle - HIV-1
ocla04144  Endocytosis
ocla04217  Necroptosis
Brite
KEGG Orthology (KO) [BR:ocla00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    139376968
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    139376968
  09143 Cell growth and death
   04217 Necroptosis
    139376968
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ocla04131]
    139376968
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ocla04147]
    139376968
Membrane trafficking [BR:ocla04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-III complex
    139376968
Exosome [BR:ocla04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   139376968
  Exosomal proteins of other body fluids (saliva and urine)
   139376968
SSDB
Motif
Pfam: Snf7 MRC1
Other DBs
NCBI-GeneID: 139376968
NCBI-ProteinID: XP_070976099
LinkDB
Position
20:80060499..80066289
AA seq 209 aa
MGNIFTRKRRTRITEQDRAVLQLKQQRDKLKQYQKRITLQLEKERNLAKQLLKDGKKEKA
LLLLKKKRYQDQLLDKTENQISNLERMCQDIEFAQIEMKVVEGLKVGNDCLKSLHEAMSI
EDVERIMDETQEGIEYQREIDEMLAGSLTQEDEDAVLAELEAITQGELDLPEVPDESLPD
VPEAADEEPEPGQERERPRKKQERGMLAV
NT seq 630 nt   +upstreamnt  +downstreamnt
atgggaaacattttcaccagaaagagacgcacacgaatcacagagcaggacagggcagtt
ttgcaactgaaacagcagagagataagttaaagcagtatcagaagagaatcaccctgcag
ctggagaaggagaggaatctagccaagcagctgctgaaagatggcaagaaagagaaggcc
ctcctcttgctcaaaaagaagagataccaggaccagctcctggacaagacagaaaaccag
ataagcaacctggagcgaatgtgtcaagacattgagtttgcccagattgagatgaaggtc
gttgaaggccttaaagttggaaacgactgcctgaagtcattgcatgaggcgatgtccatc
gaggatgtggagagaattatggatgagacccaagaaggcattgaataccagagggaaata
gatgagatgctggcaggttccctgacacaggaggatgaggatgctgtactggctgaactg
gaggccatcactcagggagagcttgacctacccgaggtacctgatgagtccctgccagac
gttccagaggcagctgatgaagaaccagagccaggtcaagagagggagaggccaaggaag
aagcaggaacgagggatgttggctgtctag

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