Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139376980
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Entry
139376980 CDS
T10872
Name
(RefSeq) vinculin-like
KO
K05700
vinculin
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04510
Focal adhesion
ocla04520
Adherens junction
ocla04810
Regulation of actin cytoskeleton
ocla04820
Cytoskeleton in muscle cells
ocla05100
Bacterial invasion of epithelial cells
Brite
Cytoskeleton proteins [BR:
ocla04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
139376980
Exosome [BR:
ocla04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
139376980
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Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
139376980
NCBI-ProteinID:
XP_070976113
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Position
20:81095705..81149306
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AA seq
1066 aa
AA seq
DB search
MPVFHTKTIESILEPVAQQISHLVIMHEEGEVDGKAIPDLTAPVAAVQAAVSNLVRVGKD
TVQTTEDHIMKRDMPPAFIKVETACTKLVQAASMLKADPYSVPARDYLIDGSRGILSGTS
DLLLTFDEAEVRKIIRVCKGILEYLTVAEVVESMEDLITYTKNLGPGMTKMAKMIDERQQ
ELTHQEHRVMLVKSMNTVKELLPVLISGIKIFVTTKTSGSQGVEESLKNRNFTFEKMSAE
INEIIRVLQLTSWDEDAWANKDTEAMKRALALIDSKMTQAKSWLRDPDAQPGDAGEQAIR
QILDEAGKVGELCAGKERRDILGTSKTLGQITDQVSEMRARGQGASPAAKQKAQQVSQGL
DVLAGKVENAGRKLEAMTNSKQVIAKRIDAAQNWLADPNGGPEGEENIRALLSEAKKIAD
MCEDPKERDDILRSIGEMAALTAKLSELRRQGKGDTPEARALAKQIATALQNLQSKTSKA
VANSRPAKAAVHLEGKIEQAQSWMENPTMDDGGVGQAAIRGLVAEGRRLANALPGPYRQE
LVGKCEQVEQLMAQLADLAARGDGESPQARAVAQHLQESLKNLKGTMQEAMTQEVSDIFS
DTTTPIKLLAVAATAPPNAPNRDQVFDERAANFENHANKLAATAEKAAAVGTANKSTVEG
IQAAVKSTRDITPQVVSAARIMLRNPGNQAALEHFETMNNQWIDNVEKMTGLVDEAIDTK
SLLDASEEAIKKDLEKCRAAMANHQPQMLVVGATSIARRANRILLVAKREVENSEDPRFR
EIVKAASDELSRTISPMVMNAKAVAGNITDPSLQKGFLDSGHRILGAVAKVRDAFQPQEP
DFPPPPPDLDQLHVSDEPAPPKPPLPEGEVPPPRPPPPEEKDEDFPEQEVGEMVSEPMMM
AARQLHEEARKWSSKGNDIIGAAKRMALLMAEMSRLVRGAGGNKRALIQCAKDIAKASDE
VTKLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKATMLGRTNISEEESEQAT
EMLVHNAQNLMQSVKETVREAEAASIKIRTDAGFTLHWIRKTPWYQ
NT seq
3201 nt
NT seq
+upstream
nt +downstream
nt
atgccggtttttcacacaaagacgatagaaagtatcctagagccggtggctcagcagata
tcccatctggtgataatgcacgaagaaggtgaggtggacgggaaagctatcccggatctc
acggctcccgtggctgcggtgcaggcagctgtcagcaacctggttcgggtggggaaagac
actgtccagaccacagaagaccacataatgaagagagacatgcctccagctttcatcaag
gtggagactgcgtgcaccaagctggtgcaggcggcgtccatgttgaaagcagacccttac
tctgtccctgctcgagattacctcatcgacggctcccgtggaatcctctctggcacctct
gacctgctgctcaccttcgacgaggctgaggttcgtaaaatcatccgtgtgtgtaaaggt
atcctggagtacctgaccgtggcagaggtggtggaatccatggaggatctgatcacgtac
accaagaacctgggacctgggatgacgaagatggccaagatgattgacgagagacagcag
gagctgacccatcaagaacaccgcgtgatgctcgtcaagtctatgaacactgtcaaggag
ttgctgcctgtcctcatctcaggaatcaagatctttgtgacgaccaagacgtccggcagc
cagggagtagaggagtctctgaagaacaggaacttcaccttcgagaagatgagtgctgag
atcaacgagatcatcagggtgctgcagctcacttcctgggacgaagacgcctgggccaat
aaggatacagaggccatgaagagagctctggcgctcatcgactctaagatgacccaggcc
aagagctggctgagggaccccgacgctcaaccaggggatgcaggggaacaggccatccgt
cagatcctggatgaggctgggaaggtgggagagctgtgtgctgggaaggagcggagggat
atcctgggaacatccaaaaccctggggcaaatcactgaccaggtgtctgagatgagggcc
aggggtcagggggcatctcctgcagccaagcagaaggcccagcaggtctcccagggcctg
gatgttctcgcggggaaagtggagaatgcaggccggaaactggaggccatgaccaactcc
aaacaggtcatcgccaagaggattgacgctgctcagaactggctggcagaccctaacggt
ggtcctgagggagaggaaaacattagagctctcctgtctgaggccaagaagatcgctgac
atgtgtgaagaccccaaggagagagatgacatcctgaggtccatcggagagatggctgct
ctcaccgccaagctctctgagctccggagacagggtaaaggtgatactccggaggccagg
gcattggcgaagcagatagccacagccctacagaacctgcagtctaagaccagcaaggct
gtcgccaacagcaggcctgccaaggctgctgtccacctggaggggaagatagagcaggcc
cagagctggatggagaaccccaccatggatgacgggggagtgggccaggcagctatccgg
gggctggtggcggagggccgtcgtctggctaatgctctgccaggtccctacagacaggag
ctggtagggaagtgtgagcaggtggaacagctgatggcccagctagccgacctggccgcc
aggggcgatggggagtccccgcaggcgcgtgccgtggctcaacatctccaggagagcctg
aaaaacctcaaaggaacgatgcaggaagcgatgacacaggaggtgtcagacatctttagc
gacacgaccactcccatcaaactgctggctgtggccgccaccgccccacccaatgccccc
aacagggaccaggtgtttgatgagagggcggccaactttgagaaccatgccaacaagctg
gctgccacggcagaaaaggctgccgctgtaggaaccgctaacaagagcactgtggagggg
atccaagctgccgtcaaatctacaagagatattacaccacaggtggtctctgctgcccga
atcatgctgagaaacccaggcaaccaggctgcgttggaacactttgagaccatgaacaac
cagtggattgacaacgtggagaaaatgacaggtttggtggacgaggctatagacaccaag
tctctgttggatgcctctgaggaggccattaagaaagacctggagaaatgtcgcgctgcc
atggctaaccaccagccccagatgttagtggtaggggccaccagcatcgcccgtcgggcc
aaccggatcctcctggtagccaaacgggaggtggagaactctgaggatcctagattcagg
gagatagtgaaggctgcgtctgatgagctgagccggaccatatctcccatggtgatgaac
gccaaggctgtggctgggaacattactgatccaagtctgcagaagggcttcctggattca
ggccataggatcctgggggccgttgccaaggtgagagatgcgttccagccacaggaacca
gacttccccccaccaccacctgatctggaccagctgcacgtcagcgacgagcccgcccca
ccaaaaccacctctccccgagggtgaggttcctccccccagaccccctcccccagaggag
aaggacgaggacttcccagagcaagaggtgggagagatggtgagcgagcccatgatgatg
gccgccagacagctccacgaggaggcccgcaagtggtccagcaagggtaacgacatcatc
ggtgcagccaagagaatggccctgctcatggctgagatgtcccgtctggtgcgcggtgcc
ggtgggaacaaacgtgccctcattcagtgtgccaaagacatcgcaaaagcctcagacgag
gtcacaaagttggccaaggaggtggccaagcagtgcacagacaaacgcatccggaccaac
ctgctccaggtgtgtgagcgcatccctaccatcagcacacagctgaagatcctctccaca
gtcaaggccaccatgttgggtcgtaccaacatcagcgaggaggagtccgagcaggccaca
gagatgttggttcacaatgcccagaacctgatgcagtctgtgaaggagacggttagagag
gccgaggctgcctccatcaagatccggacggatgccggtttcaccctgcactggatccga
aagaccccctggtaccagtaa
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