Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139376997
Help
Entry
139376997 CDS
T10872
Name
(RefSeq) cadherin-related family member 1a-like
KO
K16501
cadherin-related family member 1
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ocla04515
]
139376997
Cell adhesion molecules [BR:
ocla04515
]
Cadherins
Cadherin related
139376997
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Motif
Other DBs
NCBI-GeneID:
139376997
NCBI-ProteinID:
XP_070976148
LinkDB
All DBs
Position
20:complement(84328000..84362030)
Genome browser
AA seq
895 aa
AA seq
DB search
MKNQKKKRRCFFLLVFLVTLLLSPSLGQTDYAPYFYDNGPSSTNGNMALFSISEDTEVGT
QLYILNGTDPEGDAVWFGLTFEKGTREYLRVDPKSGNITLIQELDREKQGEILAFVSITD
GRNKVVETIRVFVTDANDEQPEFQNLPFTVDVPEDTAAGISIYRVQAVDKDMGSGGSVNY
YLLGTTTTRFTIDGHSGVLRIKPGETLDYETTATHFVIVVAKDGGGQYKGKHQVLTSTAT
ITINVLDAQDTPPAFVGTPYFGYVYEVSLPGSEISTVFAKDGDEGNPNPIHYSITNGSEG
VFTINSTSGCISLTAYPVTLRNELYEIQVKATEMGQSEELLDYYTMTVVTVRVVDLNNHP
PTFYGENGPQSQFEVTMYEHPPEGEILRGLKITVNDSDQGANAKFKLRLVGPGRVLRVVP
QTVLNEAQVTVIVEDSAAIDYEKGKSLTYKLLAVEIDTPERFSATADIVIHLLDTNDNTP
RFTSEYYIARIPENSPGGSNVVSVTANDPDSGLWGEVKYSIYGSRYDLFLIHPSSGIIYT
QAWAILDAEVKSKYNFYVKAEDTEGKYSLAEVFVTVLDINDHVPEFDDSRVERTMVIGAP
VKVEAIDADAGSPNNIIEYSIMQAEPDNIFDINSETGEINLKSYIKSMEIVQNITKQKDC
RWSLVVQARDRGSPSFSTTAVVNIDITEATQVNGPMADFLLQSRDNPMKALGMVAGVISI
LVGITVLISTATFLRNTKSNRIMPARRIVIRRRPPRDRKPWTFNVPFRGSGNDSSNKFIV
GDQEAGSVNINLNNKGGPRCSRSKSKPTPPRAPCLPPPSCPPPSSNPRPSERPRHWAAVP
TVSEGLTSTGSRTSSQSREINISSDTSRIPVSSALVSELKMRLEQKIIESNSSYY
NT seq
2688 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaccaaaagaaaaaaagacgatgttttttcctcttagttttcctggtcactctt
cttctgtctccctctctggggcaaactgactacgctccctatttctatgacaacggaccg
agcagcaccaatgggaacatggctctgttcagtatctcagaagacacagaagtcggaaca
cagctatatatcctaaacggtaccgacccagagggggatgccgtgtggtttggcctgacc
tttgagaagggcaccagagaatacttgagagtggaccctaagtcaggaaacataactctc
attcaggaactagacagagagaaacaaggtgaaatcttggcttttgttagcataacagat
ggtcggaataaggttgtcgagacgatacgggtgtttgtcaccgacgccaatgatgagcaa
ccagagttccagaacctgcctttcaccgtggacgtccccgaggacaccgcagctggaatc
agcatttacagagtgcaagcggtggataaagacatgggctctggaggcagtgtcaactac
tacttactgggcaccactactaccaggttcaccatcgacggccacagtggggtcctgcgg
atcaaaccaggcgagacgctcgactacgagacaacagcaacacactttgtgatagtggtt
gccaaggatgggggtgggcagtacaaagggaagcatcaggtgttgacatctacagccacc
atcaccatcaacgtcctcgacgcccaagacactcctccagccttcgttggaactccttac
tttggctacgtctacgaggtctcacttcctggttctgaaatatccactgtgtttgccaaa
gatggagacgaaggaaacccgaatcctattcattactctattaccaatggcagtgagggt
gtcttcaccatcaatagcacaagtggttgtatcagcctaacagcttatccagtcacgctg
aggaatgaattatatgaaatccaagtcaaagccactgagatggggcagagtgaggagctg
ttggactactataccatgactgtggtgacggttagagtggtggacctcaacaaccaccct
cctaccttctacggagagaacgggccccagagccagttcgaggtgaccatgtatgagcac
cctccagagggggagatcctcagggggctgaagataacggtcaacgactctgatcagggt
gcgaatgctaaatttaaactgcggttggtggggcctggtcgtgtgctcagagtggtgccc
cagacggtcctcaatgaagcacaggtcaccgtcatcgttgaagactctgctgccatcgat
tacgaaaaaggcaaatccttaacatacaagttactagcggtggagattgacacccctgag
aggttcagtgcgacggctgatattgtgattcatcttttggacaccaatgacaacactccc
aggttcacctcagagtattacatcgcacgtattccggaaaactcccccggaggctccaac
gttgtgtctgtcaccgccaatgatccagactctggcctttggggtgaagtcaagtactcc
atctatggatccagatatgatctgtttctcatccatccgtcttcaggcatcatatacacc
caggcctgggccattctggatgctgaggtcaagtccaagtacaacttctacgtgaaggca
gaggacacagagggaaagtacagcctggcggaggtgtttgtcactgtcctggacatcaac
gaccatgttccagagttcgatgacagccgtgtggagaggaccatggtcattggcgcacct
gttaaagtagaggcaatagatgccgatgcagggtcgcccaataacatcattgagtattcc
atcatgcaagctgagccggacaacatcttcgacatcaactcggaaacgggagagatcaac
ctgaagtcgtacatcaagtccatggagatcgtgcagaacatcaccaagcagaaggactgc
aggtggtctctggtggtccaagcccgggaccgagggtctccgtcttttagcactaccgcc
gtggtcaacatcgacatcactgaggcgactcaagtcaatgggcctatggcagacttttta
ttgcaaagtagggacaacccaatgaaggcccttggcatggtcgctggtgtcatcagcata
ttggtagggatcactgtcttgatctccacggctacgttcttgcgcaacaccaagtccaac
aggataatgccggcacgtcgcatcgtcatcagacggagaccgccaagggaccgcaagccg
tggacttttaacgtaccgttccgtggtagcggaaatgactcgtcaaacaagttcattgta
ggcgaccaggaagcagggagtgtcaacataaacctcaacaacaaaggcggcccccggtgc
tccaggtcaaaatccaagcctacgccccctagagctccctgcctgccccctccatcctgc
cctcctccgtcctccaaccccaggcccagtgagaggccccggcactgggcagcagtgccc
accgtctctgagggcctgacctccactggttccaggacatccagccagagcagggagatc
aacatcagctctgacacttctaggatccccgtcagctcagccctggtctctgaactcaaa
atgagactagagcagaaaatcattgagagcaactcaagctattattaa
DBGET
integrated database retrieval system
