KEGG   Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139377016
Entry
139377016         CDS       T10872                                 
Name
(RefSeq) striatin-like isoform X1
  KO
K17608  striatin 1/3/4
Organism
ocla  Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:ocla00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:ocla01009]
    139377016
Protein phosphatases and associated proteins [BR:ocla01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-2 (PP2A)
    Other PP2-interacting proteins
     139377016
SSDB
Motif
Pfam: WD40 WD40_Prp19 Striatin WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 EIF3I Beta-prop_WDR90_POC16_2nd Beta-prop_WDR75_1st WDR55 Beta-prop_TEP1_C WD40_MABP1-WDR62_2nd NBCH_WD40 Beta-prop_EML ANAPC4_WD40 Beta-prop_IFT140_1st Beta-prop_RIG_2nd WD40_MABP1-WDR62_1st Beta-prop_EIPR1 Beta-prop_IFT122_1st Beta-prop_Nup120_160 WDR90_beta-prop_4th Beta-prop_DCAF4 Beta-prop_IP5PC_F WD40_RFWD3 Beta-prop_SCAP Beta-prop_SPT8 Beta-prop_WDR75_2nd SOGA1-2-like_CC Prp19 DUF3246
Other DBs
NCBI-GeneID: 139377016
NCBI-ProteinID: XP_070976184
LinkDB
Position
20:complement(87505265..87580470)
AA seq 772 aa
MDEQSGPGVFFNNNSILSGGGKGLLPEGDAAEAARSPYSIPGILHFLQHEWARFDVEKVQ
WELQRAELQAQIAFLQGERKGQENLKKDLVRRIKMLEYALKQERSKYHKLKYGTELNQGD
VKPPSYDYDEVIENETPGSLNNQLSWKQGRQLLRQYLQEVGYADTILDVKSRRVQTLLGL
AGDGGGLVERTANGTDTRTRGGKTEQSESSVVQEAFRFIESSAADYSDEDDDEDGSGNDR
TIMERTGPTGTIVRKKPSSALSTSMDTSEDPDTEDALKGFDFLSSPDDMDTSPESRSAGN
GTNWEEEQHTAMSGAWDMDQGLISKLKEEYRKERKGKKVGQRPNRSKLQDMLANLRDQED
MNPREPSSTSQSRSNAPRLNDHHQDNNTDEVEVLTVPPSSGKAFILGPDVNMEAELGLGE
LAGLTVSNEADSLTYDMSNNKDALRRTWNPKFTLRSHFDGIRGLAFHPVEAVLVTASEDH
TLKMWNLQKTSPTKKNASVDVEPMHTFRAHQGAVLCVVMSSTGEQCFSGGLDGTIQSWNT
PSPNLDPYDSYEPSVLRGALCGHTDSVWGLVYSGVHQRLLSCSGDGTVRLWDASDTKPAL
VTFRSKEFGVPSSVDVVCSDPAHMVTSFTSGQIGLFNMETQQLVLSLESAAETGTPCQIN
KVLSHPTLPITITAEEDKHIKFYDNNTGKLVHSMVAHLDAVTSLAVDPNGLYLMSGSHDC
SIRLWNLETKTCIQEFTAHRKKNDESIHDVAFHPSKAYIASAGADALAKVFV
NT seq 2319 nt   +upstreamnt  +downstreamnt
atggacgaacagtcagggcccggggttttcttcaacaacaactctatcttatcgggcggt
gggaaaggactgctaccggagggcgacgcagcggaggcagccaggtcaccgtacagtatc
ccggggatcctacacttcctgcaacacgaatgggcccgcttcgacgtggagaaggtgcaa
tgggagttgcaacgcgccgaattacaggcccagatagccttcctgcagggagagaggaaa
ggacaggagaacctgaagaaggatctcgtcaggaggattaagatgctggaatatgccctc
aaacaggagaggtccaagtaccacaagttaaaatatggaacggagttgaaccaaggagac
gtgaaacctcccagctatgactacgacgaggtgattgagaatgagactcctgggtccttg
aacaaccagttgtcctggaaacaaggccgtcagctcctcagacagtatctccaggaggtg
ggttacgcagacaccatcctggatgtgaagtctcgcagggtacaaaccctgctgggtctg
gccggagacggagggggccttgtggagaggacggccaacggaacagacacccgcaccaga
ggagggaagacagagcaatctgagtccagtgttgtgcaggaggccttcaggttcatagaa
agctctgcagctgactacagtgatgaagatgatgatgaagacggttcagggaatgacagg
actatcatggaacggacaggacctacagggacgatagtgaggaagaagccatcatctgcc
ctgtccaccagtatggacacaagtgaggatccagacactgaggatgcactgaagggcttt
gacttcctgtctagtccagatgatatggacacatcacctgagtcccgcagcgcagggaac
gggaccaactgggaggaggagcagcacactgccatgtcaggggcctgggacatggaccag
ggtctgatatccaaactcaaagaggagtacaggaaggaacgcaaggggaaaaaagtaggg
cagagacctaaccggtctaagctccaggacatgttggccaacctgagggaccaggaggac
atgaatcccagagaaccctcctctacttcccagtcccgctccaacgcacccaggctcaac
gaccaccaccaggacaacaacactgatgaagtggaggtgttgacggtccctccttcctct
gggaaggcctttatcctgggtcctgatgtgaacatggaggctgaactgggcctgggagag
ctggctggtcttactgtatctaatgaggctgatagtctgacctatgatatgtccaacaac
aaggatgccctgaggaggacgtggaaccctaagtttaccctgcggagccactttgacggg
atccgaggtctggcgttccaccccgtagaagcggttctagtcaccgcctcagaggaccac
acgctgaagatgtggaacctgcagaagacttcccccaccaagaagaatgcctctgtagat
gtggaacccatgcacacgttcagggcccaccagggtgcagtgctgtgcgttgtgatgagc
agtacaggagagcagtgtttcagtggagggctggacggcaccattcagagctggaacact
ccgagccctaacctagacccatacgattcatacgagccgtctgtcctgcgtggggcgctg
tgtggtcatactgactcggtgtggggtctggtgtacagtggtgttcatcagagactcctg
tcttgctctggagacggcaccgtcaggctgtgggacgcctccgataccaagcctgccctg
gtcaccttccgcagtaaagagtttggcgtgccctcgtcagtggacgtggtctgcagtgac
cccgcccacatggtgacatctttcaccagcggtcagatcggccttttcaacatggagaca
cagcaactggtgctcagcctggagtctgctgcggagacgggtaccccctgtcagatcaac
aaggtgctgagtcaccccaccctccccatcaccatcaccgctgaggaggacaaacacatc
aagttctacgacaacaacacggggaagctggtccactcgatggtggcccacctggatgct
gttaccagtctagctgtcgaccccaatggtctctatctgatgtctggcagtcatgactgt
tctattcgtctgtggaacctggagactaagacgtgtatccaggagtttacagctcacagg
aagaagaatgatgagtctatccatgacgtggccttccacccctctaaggcctacatcgcc
tccgccggggcagacgctcttgccaaggtgttcgtatga

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