Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139377166
Help
Entry
139377166 CDS
T10872
Name
(RefSeq) 3-hydroxy-3-methylglutaryl-CoA lyase, cytoplasmic
KO
K01640
hydroxymethylglutaryl-CoA lyase [EC:
4.1.3.4
]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla00280
Valine, leucine and isoleucine degradation
ocla00650
Butanoate metabolism
ocla01100
Metabolic pathways
ocla04146
Peroxisome
Module
ocla_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
139377166
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
139377166
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
139377166
Enzymes [BR:
ocla01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.4 hydroxymethylglutaryl-CoA lyase
139377166
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMGL-like
Motif
Other DBs
NCBI-GeneID:
139377166
NCBI-ProteinID:
XP_070976273
LinkDB
All DBs
Position
20:76447846..76477326
Genome browser
AA seq
306 aa
AA seq
DB search
MGNIPTSVKHCLSYEQLIQDYPWLGCRQQEEKCTLTREYPEYVKMIEVGPRDGLQNEKEM
VPTRVKIQLINMLSETGLPVIEATSFVSSKWVPQMADHTEVLQAIHRSSHARYPVLTPNM
HGFQDSVAAGATEVAVFGSASETFSQKNINCSIDDSMLRFEEVICTAKQQQIPVRGYVSC
ALGCPYEGPIEPTKVAEVRQHFCVAALSMINHQLDDTYGQALANILTALQMGICAVDSSV
AGLGGCPYAQGASGNVSTEDVLYMLHGMGIKTGVDLSKVIEAGDFICKALNRKTNSKVAQ
ARSKSS
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgggcaacatccccacctcagtgaagcactgcctgagctatgaacaactcatccaggat
tatccgtggctaggatgccggcagcaggaggagaagtgcactttaacacgtgaatatcca
gagtatgttaaaatgattgaagttggaccaagagacggacttcaaaatgaaaaggaaatg
gttccgacaagagtcaaaatccagctgataaacatgctctcggaaacaggcctgcctgtg
atcgaggccaccagctttgtgtcttcaaagtgggtaccacagatggcagaccacactgaa
gtgcttcaagccattcacagatcttctcatgctcgttatcctgtactgacacccaacatg
cacggctttcaggattcggttgcagctggtgctactgaagtggccgtgtttgggtctgcc
tctgagaccttcagtcaaaaaaatatcaattgctctattgatgacagcatgctgaggttc
gaggaagtcatttgcactgctaaacaacaacagattccagtccgtggatatgtttcttgt
gcactaggatgtccatatgagggacccattgaacccactaaagttgcagaggtaagacaa
cacttctgcgttgccgccttgtcaatgatcaaccatcaacttgacgacacctacggccag
gctctggccaacatcctaactgcactgcagatggggatttgtgcggtggactcatctgta
gcaggtctgggcgggtgcccatatgcccagggagcctctggtaacgtgtcaacagaagat
gttctctatatgctccatggcatgggcattaaaactggagtcgatctctccaaggtaata
gaggcaggtgatttcatctgcaaagccttaaatcgcaagaccaactccaaggtagcccaa
gcaagaagcaagtcctcgtga
DBGET
integrated database retrieval system
