Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139377166
Help
Entry
139377166 CDS
T10872
Name
(RefSeq) 3-hydroxy-3-methylglutaryl-CoA lyase, cytoplasmic
KO
K01640
hydroxymethylglutaryl-CoA lyase [EC:
4.1.3.4
]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla00280
Valine, leucine and isoleucine degradation
ocla00650
Butanoate metabolism
ocla01100
Metabolic pathways
ocla04146
Peroxisome
Module
ocla_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
Brite
Enzymes [BR:
ocla01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.4 hydroxymethylglutaryl-CoA lyase
139377166
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
139377166
NCBI-ProteinID:
XP_070976273
LinkDB
All DBs
Position
20:76447846..76477326
Genome browser
AA seq
306 aa
AA seq
DB search
MGNIPTSVKHCLSYEQLIQDYPWLGCRQQEEKCTLTREYPEYVKMIEVGPRDGLQNEKEM
VPTRVKIQLINMLSETGLPVIEATSFVSSKWVPQMADHTEVLQAIHRSSHARYPVLTPNM
HGFQDSVAAGATEVAVFGSASETFSQKNINCSIDDSMLRFEEVICTAKQQQIPVRGYVSC
ALGCPYEGPIEPTKVAEVRQHFCVAALSMINHQLDDTYGQALANILTALQMGICAVDSSV
AGLGGCPYAQGASGNVSTEDVLYMLHGMGIKTGVDLSKVIEAGDFICKALNRKTNSKVAQ
ARSKSS
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgggcaacatccccacctcagtgaagcactgcctgagctatgaacaactcatccaggat
tatccgtggctaggatgccggcagcaggaggagaagtgcactttaacacgtgaatatcca
gagtatgttaaaatgattgaagttggaccaagagacggacttcaaaatgaaaaggaaatg
gttccgacaagagtcaaaatccagctgataaacatgctctcggaaacaggcctgcctgtg
atcgaggccaccagctttgtgtcttcaaagtgggtaccacagatggcagaccacactgaa
gtgcttcaagccattcacagatcttctcatgctcgttatcctgtactgacacccaacatg
cacggctttcaggattcggttgcagctggtgctactgaagtggccgtgtttgggtctgcc
tctgagaccttcagtcaaaaaaatatcaattgctctattgatgacagcatgctgaggttc
gaggaagtcatttgcactgctaaacaacaacagattccagtccgtggatatgtttcttgt
gcactaggatgtccatatgagggacccattgaacccactaaagttgcagaggtaagacaa
cacttctgcgttgccgccttgtcaatgatcaaccatcaacttgacgacacctacggccag
gctctggccaacatcctaactgcactgcagatggggatttgtgcggtggactcatctgta
gcaggtctgggcgggtgcccatatgcccagggagcctctggtaacgtgtcaacagaagat
gttctctatatgctccatggcatgggcattaaaactggagtcgatctctccaaggtaata
gaggcaggtgatttcatctgcaaagccttaaatcgcaagaccaactccaaggtagcccaa
gcaagaagcaagtcctcgtga
DBGET
integrated database retrieval system
