Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139377213
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Entry
139377213 CDS
T10872
Name
(RefSeq) protein APCDD1-like
KO
K25812
protein APCDD1
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
139377213
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Motif
Pfam:
APCDDC
TM231
Transglut_i_TM
Motif
Other DBs
NCBI-GeneID:
139377213
NCBI-ProteinID:
XP_070976315
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Position
20:complement(4181268..4203130)
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AA seq
513 aa
AA seq
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MGPSVVLLVVAVFGWAEGSSLHYSEGRSNRLLSLEKTFGRPAKHSQCHHMLKHLHHGARI
TVQIPPNIEGHWVSTSCEVRPGPEFLTRSYRFFPNNTFQANQFYYMDNHCTSPTYTLVVQ
GRLRLRQASWIIRGGTEADYQIHRTQVVCHSAEVAKDLSQRLNRSCRGTMRSKAPWEPNV
NYELWSEEGGCDCSRELNFSMHELQLQRVEKQYLHHNVDHLVEELFLGDIHTEKSQRIYY
RPSSYQAALQHAKNHDPGCVACRIIYRSDEFHPPILAPRADMTVGLTGQWVSQRCEVRPE
VLFLTRHFIFHDNNQTWEGHYYHYSDPICKHPSFSIYARGRYSRGTHSTRVMGGTEFVFK
VNHMRVMPMDLATTSLLNVFNGNECGAQGSWEVGVEQDVTLTNGCVALGIRLPHTEYELF
RMEQDAHGRYLLYNGQRPSDGSSPNRPDKRATSYQMPLVECSASSQRSEGMGEEDEDRHL
RLSNGGTPWNQNSRNFAAVLTSLVSLLLFRCHS
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atggggccttccgtagtattactcgtcgttgcggttttcggttgggctgagggttcgtcc
ctccactactcagagggccgctctaaccgcctgctgtccctggagaagacgtttggtcgt
cctgctaaacactcccagtgtcaccacatgttgaagcatctccaccacggggcccggatc
accgtccagattccccccaacatagagggacactgggtctccaccagctgtgaggtacgt
cctggcccagagttcctgacgcggtcgtaccggttcttccccaacaacacgttccaggcc
aaccagttctactacatggacaaccactgtaccagccccacctacaccctggtggtccag
ggacggctgaggctcagacaggcctcctggatcatcagaggaggaacagaggctgactac
cagatccaccgcacacaggtggtgtgtcacagtgcagaggtggccaaggacctgagccag
cggttgaaccggagctgtcggggcaccatgaggagcaaagcaccatgggaacccaatgta
aactatgagctgtggagtgaggagggtggctgtgactgctccagggagctcaacttctcc
atgcacgagttgcagctgcagcgtgtggagaaacagtacctccatcataacgtggatcac
ctggttgaggagctgtttctgggagacatccacactgagaaatcccagaggatttattat
aggccgtctagctatcaggctgcgttacaacatgctaagaaccatgaccccggctgcgtc
gcctgtcgtatcatctaccggtcggatgagttccaccctcccatcctggcgccgcgggcg
gacatgacagtggggctgactggccagtgggtgagccagcgctgtgaggtccgtcctgag
gtcctcttcctgacccgtcacttcatcttccatgacaacaaccagacctgggagggccac
tactaccactactctgaccccatctgcaaacacccctccttcagtatctacgctagaggg
aggtacagccgagggacgcactctactagagttatgggaggcacggagttcgtcttcaaa
gtgaaccacatgcgtgtgatgcccatggacctggccaccacttctctcctcaacgtgttc
aacggtaacgagtgtggcgcccagggctcctgggaggtcggagttgaacaggacgtcacc
ctgaccaatggctgcgtggcgttggggatccgcctcccacacacagagtacgagctgttc
cgcatggaacaggacgcccatggacgatacctcctatacaacggacagagaccctccgac
gggtccagccccaaccgtccggataaacgagcgacttcgtaccagatgcccctggtcgag
tgttccgctagcagtcagaggtcagagggcatgggagaggaggatgaggaccgacacctt
aggctgagtaatggtggaacaccgtggaaccagaacagcaggaactttgctgcggttctc
acatcgttggtttcacttctgttgttccgttgccatagttaa
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