Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139377261
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Entry
139377261 CDS
T10872
Name
(RefSeq) vesicle-trafficking protein SEC22b-B-like
KO
K08517
vesicle transport protein SEC22
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04130
SNARE interactions in vesicular transport
ocla04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
139377261
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
139377261
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139377261
Membrane trafficking [BR:
ocla04131
]
SNARE
VAMP, Ykt6, Sec22 (R)
Sec22
139377261
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Gene cluster
GFIT
Motif
Pfam:
Longin
Synaptobrevin
IMD
Motif
Other DBs
NCBI-GeneID:
139377261
NCBI-ProteinID:
XP_070976368
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Position
20:11332835..11345684
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AA seq
215 aa
AA seq
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MVLLTMIARVADGLPLAASMQEDEQSGRDLQHYQSQAKQLCRKLNAQSPNRCTLEAGVMS
FHYVLEHGVCYLALCEAVFPKKLVFGYLEDLQTEFHEQHGKKVPTVSRPYSFIEFDTYIQ
KTKKTYIDSRARRNLGSINTELQDVQRIMVANIEEVLQRGEALSALDTKASNLSSLSKKY
RSDAKYLNTRSTYAKIAAGAVFFITLIVYVRFWWI
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atggttttgctgacaatgatcgctcgggtagcagatggactgccgcttgctgcatcgatg
caagaagacgagcagtcaggaagagacttgcaacactaccagagccaggctaagcagctc
tgccgcaaactcaatgcccagagccccaacagatgtaccctggaggctggggtcatgtct
ttccactatgtattagaacatggtgtgtgctacttggccttgtgcgaagccgtgtttccc
aagaagctggtctttgggtacctggaagacctccagacagaattccatgagcagcatgga
aagaaagtccccacagtctccaggccgtactctttcattgagtttgacacgtacatccag
aaaaccaaaaaaacctacattgacagcagggcacggaggaacctgggcagcatcaacaca
gaactgcaggatgtccagcggatcatggtggcaaacattgaagaggtcctgcaacgagga
gaggccctatcagctctcgacaccaaagccagcaatctgtccagcctttcaaagaagtac
cgcagcgatgccaagtacctcaacacccgatccacctatgctaagatagcagccggggca
gtcttcttcattacccttatcgtctatgtgcgtttctggtggatctga
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