Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139377309
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Entry
139377309 CDS
T10872
Name
(RefSeq) paired box protein Pax-3-like
KO
K09381
paired box protein 3/7
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ocla03000
]
139377309
Transcription factors [BR:
ocla03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
139377309
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
PAX
Pax7
Homeodomain
Homeobox_KN
HTH_23
HTH_Tnp_IS1
Motif
Other DBs
NCBI-GeneID:
139377309
NCBI-ProteinID:
XP_070976429
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Position
20:complement(17862777..17907631)
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AA seq
491 aa
AA seq
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MTALAGGIPRMMRPTHHQNYPRGGYSLEVSTPLGQGRVNQLGGVFINGRPLPNHIRHKIV
EMAHHGIRPCVISRQLRVSHGCVSKILCRYQETGSIRPGAIGGSKPKQTSTPDVDKKIEE
YRRDNPGMFSWEIRDTLLKDGICDRNNVPSGNAANISSISRTMRCKFGGGAGEDEEDDDE
IEKRELEENERRAKHSIDGILGDRSSHSDEGSDVDSEPGLPLKRKQRRSRTTFSAEQLEE
LERAFERTHYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQAGANQLMAFNHLIPGG
FPPSAMSSLQPYQLSDSPYPPTSISQKQPSTVLRPQPLPPTSVHQGGLSSSAGAQDGSSA
YCLSSGRHGFSGYSESFVPPSGHSNSVNPSISNGLSPQVMGLLNPGGVPHQPSHQSDFAL
SPLTGGLEPGVGMAASCHGSQRGLEGLPGLTSMPSSQSYCPPTYSSPAYAMEHHPSYQYG
QYGQSKVPFII
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgacagctctagccgggggcataccgagaatgatgcgcccgacacaccaccagaactac
ccgcggggaggctactctctggaagtctctaccccgttaggccagggccgggtgaatcaa
ctcggtggagtgtttattaacggcagacccttgcccaaccacattcgccacaagatcgtg
gagatggcccaccacggcattcgaccctgtgtcatctcccgccagctccgagtctcccac
ggctgcgtgtccaaaatcctttgccggtatcaggagaccggctccatcaggcccggggcc
atcggaggcagcaaaccgaagcagacatccaccccagacgtggataagaagatcgaggaa
tacaggagagacaacccgggaatgttcagctgggaaatcagggatacattactcaaagac
ggcatctgcgacagaaacaacgtcccctcaggcaatgctgcaaatatttcttcaatcagc
cgcaccatgcgttgtaaattcgggggaggtgcaggagaagacgaggaggacgatgatgaa
atcgagaagagggaattggaagagaacgaaagaagggcgaaacacagcatcgacggcatc
ctcggggatagatccagccactcagacgagggttcggatgtggactcggagccgggcctg
ccactgaagaggaaacagcgtcgcagtaggaccaccttttcagccgagcagctggaggag
ctggagagagcctttgaacgaacacactaccctgatatatacaccagagaagagctagct
cagcgggccaaactcacagaggccagagtacaggtgtggttcagcaacaggagagccagg
tggagaaaacaggcaggagccaatcagctgatggcatttaatcacctgatccctggcggt
ttcccaccttcggccatgtcgagtttgcagccctatcagctgtcagacagcccctaccct
cccacctccatatcacaaaagcagcccagtacggtcctcaggcctcagcccctccccccc
acctcggtgcaccagggtgggctcagctcctcagcgggggcccaggacggtagttcggcc
tactgcctgtcttctggacgccatggcttctccggctactcggaaagcttcgtgcccccg
tctggccactccaactcagtcaaccccagcatcagcaatggtctttcaccacaggtaatg
gggctgttaaacccaggaggagtaccccaccagcccagccaccagagtgactttgccctc
tctcccctgaccggagggcttgagcccggggttggcatggcggccagctgccacggctcc
caacggggcttggagggtctgccaggcctgaccagcatgcccagctcccagtcctactgc
ccacccacctacagctcgccagcctacgccatggaacaccacccctcctaccagtacgga
cagtacggacaaagcaaggtgcctttcattatctga
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