Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139377450
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Entry
139377450 CDS
T10872
Name
(RefSeq) TANK-binding kinase 1-binding protein 1-like
KO
K12652
TANK-binding kinase 1-binding protein
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
139377450
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Gene cluster
GFIT
Motif
Pfam:
TBD
Zn-C2H2_12
MTBP_N
Fib_alpha
Cnn_1N
SKA1
PKcGMP_CC
DUF7620
Motif
Other DBs
NCBI-GeneID:
139377450
NCBI-ProteinID:
XP_070976582
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All DBs
Position
20:complement(44906230..44965316)
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AA seq
646 aa
AA seq
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MESLFGGELRLLEGGEGLKEDSCGDVGWSSSTLPDDMYSVSHFALITAYQDIKTRLAGLE
RENSGIKRKLKIYEIKFPMISEFGEDRNSYCSFESKETTLLQSENGNLQQKVSTLTHELQ
KRKELQEQLEDVIQAYEKIHMEKNNLQRDLDKMTSLVEKHAEHIVDLESALRQRDNSLQK
LNTQLHSKDIQYLQLHSPDNHLLDCPALTLQSSRSLDTLSDLKLQRLEVELERARHEAER
ACQREEEVKAECERLQEELRQIQNNHIGREMTSPCEQCDVEWIKKVGDEQVNLALAYTEL
TEELGRLQALSSKQKEILRMVSQEQHSPVQRHSHPPSPIPHQRHSPVPQRHSPIPQRHSP
VPPQHHSPIAQCRSPVLQPQHLSPDMHRRSPLLDVNDGPASYSCRPASHHLRASFQGRRS
YSEVADPSAYQRPPRFSLDPVSTLPKPRPYRDSGYSKQHQQHEHGGSQHGGSPHRGGQLR
ASQSGLERAGSEVGLHESSCHSRELPFPLSEVSPRSHLHFEPLPPPTSAPQLPQSSEDEE
EWTCPHPISPPRTLGVPNNVSAHGVMKGPASCSAFPIPSRPNTLTCHPPGYLHTDHAQSW
PSINLWMETEESDMRSCPLCQLIFPMGYPDDALIKHIDSHLENSKI
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atggaatctctattcggtggtgagctgaggctactggaaggtggcgagggcttgaaggag
gacagctgtggtgacgtgggctggtcctcctcaaccctccctgatgatatgtactccgtc
tcccacttcgccctcatcaccgcctaccaggacatcaagacacggctcgcgggcctggag
agagagaacagtggcatcaagaggaagctcaagatctacgagatcaagttccctatgatc
agtgagtttggggaggacaggaactcctactgcagctttgagtccaaggagacaactcta
ctgcagtcagagaacggcaacctgcagcagaaagtcagcaccctcacccacgagctccag
aagaggaaagagctccaggagcagctggaggatgtgatccaggcctatgagaagatccac
atggagaagaacaacctccagagagacctggacaaaatgaccagtctagtggagaagcac
gcggagcatatcgtggatctggagtctgctctgagacagagagacaactcgctacagaag
ctcaacacccagctacacagcaaggacatccaatacctgcagctacatagcccagacaat
cacttgctggactgtcctgcgctgaccctgcagagctctcgtagtctagacactttgtca
gacctgaagctgcagcgtctggaggtggagctagagagggcgcggcatgaggccgagcgg
gcgtgtcagagggaagaggaagtgaaggccgagtgtgagagactgcaggaggagctgaga
cagatccagaacaaccacatagggagggaaatgacttcgccgtgtgagcagtgtgatgtg
gagtggataaagaaggtgggagatgagcaggtgaatttggcgttagcctacacagagcta
actgaggagttgggacgtctccaagcactgagctccaaacaaaaagagatcttgaggatg
gtctctcaggagcagcatagcccagtccaacgccactcccaccccccttctcccatccct
caccaacgccactcccctgtgccccagcgacactcccccatcccccaacgccactccccc
gtccctcctcagcaccactcccccattgcccagtgccgctccccggtgctccagccgcag
catctctccccggacatgcaccgccgctcgcccctgctggacgtcaacgatgggcctgcc
tcctactcctgccggccagctagccaccacctgagggccagcttccagggccgacggagt
tactccgaggtggccgacccctcggcctaccagcggccaccgcgcttcagcctggacccc
gtgtccacactgcccaagccccggccctacagggactccggctactcaaagcagcatcag
cagcatgagcatggaggctcccagcatggagggtcaccccacagaggaggccagctccga
gcctcccagtctgggctagagagggcagggagtgaggtgggcctccacgaaagttcctgc
cactctcgagagctgcccttccccctgtccgaggtctctcccaggtctcacctgcacttt
gagcctctgcccccccccacgtctgccccccagcttccgcagtcctctgaagacgaggaa
gagtggacctgtccgcaccccatcagccccccacggacgctgggcgtgcccaacaatgtg
tcagctcatggggtcatgaaggggccagcgtcctgctcggccttccccatcccatccaga
cccaacactctgacctgccacccgccaggctacctgcacacagatcacgcccagtcctgg
ccctccatcaatctgtggatggagacagaagagagtgacatgagaagctgccctctgtgc
cagctgatctttcccatgggttaccctgacgacgccctaatcaagcacatcgactcgcac
ctggagaacagcaagatctga
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