Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139377497
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Entry
139377497 CDS
T10872
Name
(RefSeq) growth/differentiation factor 10-like
KO
K22674
growth differentiation factor 10
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
139377497
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
ocla04052
]
139377497
Cytokines and neuropeptides [BR:
ocla04052
]
Cytokines
Transforming growth factors (RSTK binding)
139377497
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
TGF_beta
TGFb_propeptide
Bystin
Motif
Other DBs
NCBI-GeneID:
139377497
NCBI-ProteinID:
XP_070976633
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All DBs
Position
20:55285027..55289700
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AA seq
448 aa
AA seq
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MAKILLHLVHLLLFLNSSIGEVSSVEPSDMTQHDSNIEQATDHSSARETASRDMVSINMF
KLYEKYSKEPHRYRDGNTVRSFKAIPRVSANSVWFHFNLSTIQESEVILSATFHFLDQRP
RHRPWICRRSRNASCRLQQLPPSQLLFRGTSPNSAFASPLGNVTLPPPRRGSWQTREVSG
VVKEAHVLGELLISAEFDFGVRPQRNQERLSPASLPYVLVYANDMSISEPNSVAMTLQRY
GPFPSGEEPTRSPNASPPASRLKREAVSPLDQIQNNDLPEVQFHTLKNHELWESTYFAPK
IKPSMKHGRKQGQDSSDGLNKPQVLSFDERTMKKARRRQWSEPRVCARRYLRVDFADIGW
SEWVLAPKAYDAYYCAGTCRFPIPKVLRPSNHATIQSIVRAVGIVPGIPEPCCVPDRMSS
LSVLFLDPSRNMVLKVYPNMSVETCGCR
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagatattattacatctggtgcatttgttattatttttaaattccagtatcggg
gaagtttcatccgtggagccatccgacatgacgcagcacgacagcaatatcgaacaggct
acggatcactcttccgcgcgcgaaaccgcatcgcgggacatggtctcaatcaatatgttc
aaactctatgaaaagtacagtaaggagcctcaccgttatcgagacggaaataccgtgaga
agttttaaagctattccaagagtctctgcgaacagcgtgtggttccatttcaacctgtcg
accatccaggagtcggaggtcatcctgtccgccacattccacttcctggaccagcgtccc
cgccaccggccctggatctgccggcgctcccgaaacgcttcctgtcgcctccagcagctt
cccccgtcccagctcctcttccgaggaacgtccccgaactctgcctttgcctccccgctg
ggcaacgtcaccctgccccctcccaggagagggtcctggcagacaagggaagtctccggt
gtagtcaaagaggcccacgtcctgggagagctcctcatctctgcagagtttgactttggg
gtgaggccccagaggaaccaggagcgcctctctccagccagcctaccatatgtcctggtg
tatgccaacgacatgtccatatctgagcccaacagcgtggccatgaccttgcagaggtac
gggcctttcccttcaggcgaggagcccacccggtcccccaatgcatctcctccagcctcc
aggctgaaaagagaagcagtgtcccccctggaccaaatacagaacaatgacctgcctgaa
gtccagtttcacaccctgaagaaccatgaactatgggagagcacttattttgcccctaag
attaagccctcaatgaaacatgggcgaaagcaaggccaggacagcagtgacggcttgaat
aagccccaggtgctgagctttgatgagaggaccatgaaaaaggcacgcaggagacagtgg
agtgagcccagggtctgcgcccgacgctacctgagagtggactttgcagacatcggctgg
agcgagtgggtgttagccccgaaagcctatgatgcctactactgtgcaggcacctgcaga
tttcctattccaaaggttctccggccctcgaaccacgccaccatccagagcattgtgagg
gcggtgggaatcgttcccggcattccggagccctgctgtgttccggacaggatgagctct
ctgagtgttctcttcctggaccccagccggaacatggtgctgaaggtttaccccaacatg
tctgtggagacctgtggctgccggtag
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