Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139378435
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Entry
139378435 CDS
T10872
Name
(RefSeq) lumican
KO
K08122
lumican
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
Proteoglycans [BR:
ocla00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class II
139378435
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NCBI-GeneID:
139378435
NCBI-ProteinID:
XP_070976708
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Position
21:7753371..7757547
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AA seq
342 aa
AA seq
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MFPLRVPIFAVLVSLTVGQYDDYDYQPASQYGPSSGNCAQECECPINFPTAMYCDSRNLK
FVPIVPSGIKYLYLQNNLIEEIKAGVFDNVTAELRWLVLDHNQITNEKVAKGTIDKLTGL
HKILFSFNKLTEAVIPPSKSLDELKMMNNQLSKFPAGSLAGMQNLTSVHLQNNELTSKAL
NGVFKGLNKLVAIDLTHNKLKKLPSGMPSSLETFYGDHNDISSIAAGDLKELPKLAYLRL
AYNQMTDAGIPAGVFNVTSLIELDLSYNKLQSIPEINEQLEHLYLQANEINKFNLENICK
FSGPLNYSRLKHLRLDGNNITHADLPHDSSNCLRQASDIIFD
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgtttcccctccgtgtccccatctttgccgtgctggtcagcctgaccgtgggtcagtac
gatgactacgactaccagccggcctcccagtatggcccgtccagcggcaactgtgcccag
gaatgcgagtgccccatcaacttccccactgccatgtactgtgactcccgcaaccttaag
tttgtgcccattgtgccctcaggcatcaagtacctgtacctgcagaacaacctgatcgag
gagatcaaggctggggtcttcgacaacgtcacggctgaactccgttggctggtcctggac
cataaccagatcaccaatgagaaggtggccaagggaaccatcgacaagctgaccggactt
cataagatcttgttcagcttcaacaaactgacggaagctgtgatccctccctccaagtcc
ttggacgagctgaagatgatgaacaaccagctgtccaagttccctgcagggagtctggcc
ggcatgcagaacctgacctcggtccacctccagaacaacgagctgacctctaaagctctt
aacggggtcttcaagggcctcaacaagctggtggccatagacttgacccacaacaagctg
aagaagctgccctcaggcatgcccagttcgctggagaccttctatggcgatcacaatgac
atcagcagcattgccgccggggacctcaaagagctgcccaagctggcgtacctgaggttg
gcctacaatcagatgacggatgcagggattccggcgggcgtgttcaatgtgacgagcctg
atcgagctggatctgtcctacaacaagctgcagtccatccctgagatcaacgaacagctg
gagcatctctatctgcaggccaacgaaatcaacaagttcaacctggagaatatttgcaag
ttctctggccctctgaactactccagactgaagcacctgcgtctggatgggaacaacatc
acacatgccgacctaccccatgactcctccaactgcctgcgccaggcctctgacatcatc
ttcgactaa
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