Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139378463
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Entry
139378463 CDS
T10872
Name
(RefSeq) sodium- and chloride-dependent glycine transporter 2-like
KO
K05038
solute carrier family 6 (neurotransmitter transporter, glycine) member 5/9
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
139378463
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ocla02000
]
139378463
Transporters [BR:
ocla02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
139378463
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Gene cluster
GFIT
Motif
Pfam:
SNF
PIRT
Motif
Other DBs
NCBI-GeneID:
139378463
NCBI-ProteinID:
XP_070976755
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Position
2:85283833..85300086
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AA seq
773 aa
AA seq
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MARATDCSEEMNNRQVSDPSTQESLPQSDNGAVGVAINKQDNVPDLPSSNWQNPSKTEEQ
TFSQPVDRPNTRNGTFKTDAPAMHNTDVDGAECATVDHFTTHSHGTDSCPNESVTTSPVE
QNGTGTEISPTTVILETDGNISVLPGTVTGDGDDDDEGGDENKARGNWSNKMDFILSMVG
YAVGLGNVWRFPYLAFQNGGGAFLIPYLIMLGLAGIPIFLLEVSLGQFASQGPVSVWKAI
PALQGCGIAMLIISVLIAIYYNIIMCWTLYYLFASLKGSLPWANCKNKWNTQHCMDKDML
LLDSCILRDGNATSIRNTTLCLSADVIGNLSKLTNITSEINKTYVSPSEEYFKYNVLNIS
RGIEYPGEIRWPLALCLLLAWVIVYASLAKGIKSSGKVVYFTATFPYVVLVILLVRGVTL
PGAGDGILYFITPKWEKLYDAKVWKDAATQIFFSLSAAWGGLITLSSYNKFHNNCYRDTI
IVACTNSATSIFAGFVIFSVIGFMAHELKVPIEQVADGGPGIAFVVYPEALTRLPFSPFW
AIIFFLMLLTLGLDTMFATVETIVTSVSDEFPRYLRKYKALFTLGCCTSFYILGYPLITE
NGMYMLQLLDTYAGSYSLIIIAIFELVGVSYIYGLTRFCEDIEMMIGFQPNIFWRVCWAF
VTPTILTFILGLSLYHWKVMTYETYTYPTWSMVMGWLMVVCSVIWIPIMFGIKMHLAPGT
FIQRLKLVCSPQPDWGPFLMKHRGERYKNMIDPLGTNSLGLILPPKGLGQTQC
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
atggctagggctacggattgttctgaagagatgaacaaccggcaggtatctgatccttcc
actcaggagtcgttaccacaatcagataatggagcggtaggagtagcaataaacaaacaa
gataatgtcccagatctaccctcttcaaattggcagaatccctcaaaaaccgaggaacaa
actttttctcaaccggtggataggcctaacacaagaaatggaacgtttaaaaccgacgca
cctgcaatgcataataccgacgttgatggagccgaatgtgccactgtggatcattttacg
acacacagtcatggcacagattcctgtcccaatgaaagtgttacaacgagcccagtagag
caaaatggcacggggacggagattagtcccaccactgtgatattggagacagatggaaac
atttcggttctacctggcacagtgaccggggacggggatgatgatgacgaaggaggagat
gagaataaagcgaggggaaactggtccaataaaatggacttcattctctcaatggttgga
tatgctgttggtttgggaaacgtctggagattcccatacctagccttccaaaatggagga
ggtgctttcttgattccttatctaatcatgttgggtcttgctggaatccccatattctta
ttggaggtgtccttggggcagtttgcaagccaaggacccgtgtccgtatggaaagcaatc
cctgctcttcaaggttgcgggattgccatgttgataatatcagtcttgatagccatatac
tataacataataatgtgctggacattgtactacctgttcgcttcgttgaagggctcactc
ccctgggcgaactgcaagaacaaatggaacactcaacactgcatggacaaagacatgctt
cttcttgattcatgcattctgcgggatgggaacgccacctctataaggaatactacacta
tgtttgtctgctgatgtcattgggaatctgagcaaactcactaacatcacatctgagatc
aacaaaacctatgtcagcccaagtgaagagtattttaaatataatgtactgaacatctcc
agaggaatagaatacccaggggaaatccgctggcctctggccctctgtcttctcttggca
tgggttattgtctacgcctcactggctaaaggaatcaaatcatctgggaaggtggtgtat
ttcacggctacgttcccctacgtggtgctggtgattctgctggtcagaggagttactctg
cctggagctggggatggcatcctctacttcatcactcccaagtgggagaaactctacgat
gccaaggtgtggaaggatgctgcaacccagatcttcttctccttgtcagcagcctggggt
ggactcatcacgctgtcctcctacaacaagttccataacaactgctacagggacaccatc
attgtggcctgcaccaacagtgccaccagcatctttgcagggtttgtcatcttctctgtc
atcgggtttatggctcatgagctgaaagtgcccatcgaacaggtggctgatgggggtcca
ggcatagccttcgtagtgtatccagaggccctcaccagacttcctttctctcctttctgg
gccatcatcttcttcctcatgctactcaccctgggactggataccatgtttgccaccgtt
gagaccatagtgacgtctgtgtcagatgagttccccagatatctgaggaagtacaaggcc
ctcttcaccctggggtgctgcacctctttctacatcctggggtaccccttgatcacagag
aatggaatgtatatgcttcagctgctggacacatatgcaggctcatactctctgatcatc
atcgccatctttgaacttgtgggagtatcatacatttatggtctgacgaggttctgtgaa
gacattgaaatgatgatcgggttccagccaaacatattctggagggtctgctgggccttt
gtgacccccaccattctcacatttatcctgggtctgagtctgtaccactggaaggtgatg
acctatgagacctacacctaccccacctggtccatggtgatgggctggctcatggtggtg
tgttctgttatctggatccccatcatgtttggcatcaagatgcacctggcccccggcacc
ttcatccagcgtctgaagctagtgtgctcccctcagccagactggggccccttcctgatg
aagcacagaggagaacgctacaagaacatgatcgacccgctaggaaccaactccctgggg
ctcatactccctcctaaaggcctgggccagacccagtgctaa
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